DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and Nkx1-2

DIOPT Version :10

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_033149.1 Gene:Nkx1-2 / 20231 MGIID:104806 Length:305 Species:Mus musculus


Alignment Length:282 Identity:70/282 - (24%)
Similarity:107/282 - (37%) Gaps:66/282 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   362 HPLGSQQ-----------------QQQQQQQHQQHPQQQQHPQQQQQQHPHQPTTPTSSSSSGGG 409
            :|:|||:                 .:.::::..:...:...|::.|..|...|.....:..    
Mouse    63 NPIGSQETPDAVGRGIDPGSPVEGSEAEEEEEAEDAGRAHQPERWQGVHEGSPEARAVAVG---- 123

  Fly   410 SSLTHHPHPHLTGSHGGYLLPSSSNESDEEGEEIIEEDDGTDGPSDSSSPHGDGNSKRKKKTRTV 474
                                      ::|.|.|.:....|:.|.........:.:..:.::.||.
Mouse   124 --------------------------TEESGAEGLPASPGSPGSPRPRRRRAESSCAKPRRARTA 162

  Fly   475 FSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVKIWFQNRRNKWKRQLAAELEAANMANM 539
            |:..|:..||:.|...||||..||..||.||.||||||||||||||.|||:|    ...|:.|..
Mouse   163 FTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ----NPGADGAVQ 223

  Fly   540 AHAAQRLVRVP--VLYHDGTTAGFVP-PPPPHHHPMQYYAAARNTSPPRP----PLSSLVXGVGC 597
            |.........|  |....|:..|..| ||.|...|.|.:.....|:...|    ||::.. |   
Mouse   224 AGGGAPQPGTPGAVAGGGGSATGSSPGPPVPGALPYQTFPTYPATNVLFPAASFPLTTAANG--- 285

  Fly   598 LATAPMSLLKPPNSMA--HPPH 617
               :|.:....|:.:.  :.||
Mouse   286 ---SPFTPFLGPSYLTPFYAPH 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeodomain 469..525 CDD:459649 33/55 (60%)
Nkx1-2NP_033149.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 51..158 13/124 (10%)
Homeodomain 157..213 CDD:459649 33/55 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 210..257 15/50 (30%)

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