DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and ceh-51

DIOPT Version :10

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_507685.1 Gene:ceh-51 / 180233 WormBaseID:WBGene00013583 Length:234 Species:Caenorhabditis elegans


Alignment Length:228 Identity:58/228 - (25%)
Similarity:95/228 - (41%) Gaps:57/228 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   315 SSSTNTTENPPSPTSMS----PNNNNNNSNTTASSNQASKSPSHHPLHPLYHPLGSQQQQQQQQQ 375
            ||:.|:|....:.|.|.    |:::..:.:::.:...|.::||     |.|....:|...|||..
 Worm    19 SSNLNSTSAITNATVMEYSTMPSSSPGSMSSSPAYPAAYQAPS-----PCYVADPNQLYYQQQLA 78

  Fly   376 H-------QQHPQQQQHP-----QQQQQQHPHQPTTPTSSSSSGGGSSLTHHPHPHLTGSHGGYL 428
            |       |.|.|..|..     |||..|     .:|:|            .||| :...|.|::
 Worm    79 HNGNDMLVQAHAQAYQAQCFAWFQQQYSQ-----LSPSS------------FPHP-MVAHHAGFI 125

  Fly   429 LPSSSNESDEEGEEIIEEDDGTDGPSDSSSPHGDGNSKRKKKTRTVFSRAQVFQLESTFDLKRYL 493
            .|..|....:..:                  |....|::::..||.||.:|::.|.:.|:....:
 Worm   126 PPPPSFLHHQHQQ------------------HPRAPSEKRRGARTPFSDSQLYALRTRFEQCDTI 172

  Fly   494 SSSERAGLAASLRLTETQVKIWFQNRRNKWKRQ 526
            ...||..|.|.:.|:..|:||||||||.|.:::
 Worm   173 KVDERRKLGAVIGLSPEQIKIWFQNRRFKLRKE 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeodomain 469..525 CDD:459649 22/55 (40%)
ceh-51NP_507685.1 Homeodomain 148..204 CDD:459649 22/55 (40%)

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