DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and Msx3

DIOPT Version :10

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_034966.1 Gene:Msx3 / 17703 MGIID:106587 Length:204 Species:Mus musculus


Alignment Length:144 Identity:57/144 - (39%)
Similarity:68/144 - (47%) Gaps:18/144 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   408 GGSSLTHHPHPHLTGSHGGYLLPSSSNESDEEGEEIIEEDDGTDGP-------SDSSSPHGDG-- 463
            ||....|.|.|....|    ||.:......|.||..:|...|...|       :.|..|....  
Mouse    17 GGGHTEHGPLPFSVES----LLEAERVPGSESGELGVERPLGASKPGAWPPPVAHSCPPRAPSPP 77

  Fly   464 -----NSKRKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVKIWFQNRRNKW 523
                 ..|..:|.||.|:.||:..||..|..|:|||.:|||..::||.||||||||||||||.|.
Mouse    78 PCTLRKHKTNRKPRTPFTTAQLLALERKFHQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKA 142

  Fly   524 KRQLAAELEAANMA 537
            ||...||||...:|
Mouse   143 KRLQEAELEKLKLA 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeodomain 469..525 CDD:459649 33/55 (60%)
Msx3NP_034966.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..89 9/49 (18%)
Homeodomain 88..144 CDD:459649 33/55 (60%)

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