Protein Alignment Hmx and cog-1

DIOPT Version :10

• Sequence 1: NP_001262674.1
• Gene: Hmx / 42110
• FlyBaseID: FBgn0264005
• Length: 718
• Species: Drosophila melanogaster
• Sequence 2: NP_001022264.1
• Gene: cog-1 / 175149
• WormBaseID: WBGene00000584
• Length: 256
• Species: Caenorhabditis elegans
• Alignment Length: 247
• Identity: 64/247 - (25%)
• Similarity: 104/247 - (42%)
• Gaps: 63/247 - (25%)

  Fly   324 PPSPTSMSPNN--NNNNSNTTASSN----QASKSPSHHPLHPLYHPLGSQQQQQQQQQHQQHPQQ 382
            ||..|:....:  |..:|:|.:.||    :...|||           ||..:......:
 Worm     8 PPQLTTPDDKDVENRKHSSTYSISNLLLEKKESSPS-----------GSSSEDDSASSN------ 55

  Fly   383 QQHPQQQQQQHPHQPTT----PTSSSSSGGGSSLTHHPHPHLTGSHGG---------YLLPSSSN 434
                 ...|:.|...::    |.|||||...::........|..:.|.         :||.|..|
 Worm    56 -----DDDQRSPSATSSFIFPPASSSSSSESATSPTQIMAQLMANGGAVDPGLQAYFFLLQSQLN 115

  Fly   435 ESDEEGEEIIEED-----------DGTDGPSDSSSPHG----------DGNSKRKKKTRTVFSRA 478
             |......:.:|:           :...|...|.||.|          :..:.:||::|..|:..
 Worm   116 -SQSMMNRVTQENVSRALTSFNLLNNLPGALPSLSPMGRLQHSMQLSPNSLNMQKKQSRPTFTGH 179

  Fly   479 QVFQLESTFDLKRYLSSSERAGLAASLRLTETQVKIWFQNRRNKWKRQLAAE 530
            |::|||..|:..:||:.::||.||..|.::|:|||:||||||.||:::.||:
 Worm   180 QIYQLERKFEQTKYLAGADRAQLAQELNMSESQVKVWFQNRRTKWRKKEAAD 231

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hmx	NP_001262674.1	Homeodomain	469..525	CDD:459649	27/55 (49%)
cog-1	NP_001022264.1	Homeodomain	170..226	CDD:459649	27/55 (49%)