DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and Hmx3

DIOPT Version :9

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_032283.3 Gene:Hmx3 / 15373 MGIID:107160 Length:356 Species:Mus musculus


Alignment Length:497 Identity:149/497 - (29%)
Similarity:194/497 - (39%) Gaps:199/497 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 SPPMKSPERNGGDEVQGHSLNNNNSKALNHNN---------------TCASAAAAAAAAAVAAAN 205
            :||.:.|.:....:....|:.|    .||.::               ..|||||||||||.||| 
Mouse    14 APPPQPPPQPPAPKESPFSIRN----LLNGDHHRPPPKPQPPPRTLFAPASAAAAAAAAAAAAA- 73

  Fly   206 LSNNSNDSNGSSGGGGG--KSTTGSNGFTSFSISSILSRSEPAKKNGAAGLITPIPQLPQPGAGG 268
                    .|:..|..|  .|..|...|..|.|        ||::..          ||      
Mouse    74 --------KGALEGAAGFALSQVGDLAFPRFEI--------PAQRFA----------LP------ 106

  Fly   269 PQDAAMLSRLGFISQWGALAGRYAALCPPGWPWAPQRLP---FHSPTHDSS----------STNT 320
               |..|.|                  .|.| |.|..|.   .|.|..::|          ::.|
Mouse   107 ---AHYLER------------------SPAW-WYPYTLTPAGGHLPRPEASEKALLRDSSPASGT 149

  Fly   321 TENPPSP-TSMSPNNNNNNSNTTASSNQASKSPSHHPLHPLYHPLGSQQQQQQQQQHQQHPQQQQ 384
            ..:.|.| ....|::...:          ||||....|           ::...::.::..:   
Mouse   150 DRDSPEPLLKADPDHKELD----------SKSPDEIIL-----------EESDSEEGKKEGE--- 190

  Fly   385 HPQQQQQQHPHQPTTPTSSSSSGGGSSLTHHPHPHLTGSHGGYLLPSSSNESDEEGEEIIEEDDG 449
                         ..|.::.::.|.::.|                |.|             ||..
Mouse   191 -------------AVPGAAGTTVGATTAT----------------PGS-------------EDWK 213

  Fly   450 TDGPSDSSSPHGDGNSKRKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVKI 514
            ....|....|     :.|||||||||||:||||||||||:||||||||||||||||.||||||||
Mouse   214 AGAESPEKKP-----ACRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKI 273

  Fly   515 WFQNRRNKWKRQLAAELEAANMANMAHAAQRLVRVPVLYHDGTTAGFVPPPPPHHHPMQYYAAAR 579
            |||||||||||||||||||||:::.  ||||:||||:|||:.:.|                    
Mouse   274 WFQNRRNKWKRQLAAELEAANLSHA--AAQRIVRVPILYHENSAA-------------------- 316

  Fly   580 NTSPPRPPLSSLVXGVGCLATAPMSLLKPPNSMAHP---PHP 618
                         .|....|.||:.:.:|..:..||   .||
Mouse   317 -------------EGAAAAAGAPVPVSQPLLTFPHPVYYSHP 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeobox 471..524 CDD:278475 49/52 (94%)
Hmx3NP_032283.3 Homeobox 230..284 CDD:365835 50/53 (94%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 111 1.000 Domainoid score I6236
eggNOG 1 0.900 - - E1_KOG0485
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003349
OrthoInspector 1 1.000 - - otm42352
orthoMCL 1 0.900 - - OOG6_109246
Panther 1 1.100 - - O PTHR46110
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4603
SonicParanoid 1 1.000 - - X983
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.930

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