DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and Hmx1

DIOPT Version :9

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_034575.1 Gene:Hmx1 / 15371 MGIID:107178 Length:332 Species:Mus musculus


Alignment Length:306 Identity:118/306 - (38%)
Similarity:152/306 - (49%) Gaps:98/306 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   367 QQQQQQQQQHQQHPQQQQHPQQQQQQH------------------PHQPTTPTSSSSSGGGSSLT 413
            ::::.......:.|:|.:...|:::|.                  |..|..|....:.|.|.:..
Mouse    44 EEEEDDDDPEDEDPEQARRRLQRRRQQRAGSGPGGEARARALGLGPRPPPGPGPPFALGCGGTTR 108

  Fly   414 HHPHPHLTGSHGGYLLPSSSN-ESDEEGEEI---------------IEEDDGTDGPSD------- 455
            .:|..|  |.:||.|.|.:|: :|.|.|||:               :..:..|.||:.       
Mouse   109 WYPRVH--GGYGGGLSPDTSDRDSPETGEEMGRAESAWPRCPGPGTVPREVTTQGPATGGEEAAE 171

  Fly   456 -------SSSPHGDGNSKRKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVK 513
                   :::..|:....|:|||||||||:|||||||||||||||||:|||||||||:|||||||
Mouse   172 LAEAPAVAAAATGEARGGRRKKTRTVFSRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVK 236

  Fly   514 IWFQNRRNKWKRQLAAELEAANMANMAHAAQRLVRVPVLYHDGTTAGFVPPPPPHHHPMQYYAAA 578
            |||||||||||||||||||||:::  ...||||||||||||:.         ||        |||
Mouse   237 IWFQNRRNKWKRQLAAELEAASLS--PPGAQRLVRVPVLYHES---------PP--------AAA 282

  Fly   579 RNTSPPRP-PLSSLVXGVGCLATAPMSLLKPPNSMAHPPHPQPPPP 623
               .|..| ||:                         ||.|.||||
Mouse   283 ---GPALPFPLA-------------------------PPAPAPPPP 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeobox 471..524 CDD:278475 49/52 (94%)
Hmx1NP_034575.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 28..170 25/127 (20%)
Homeobox 194..247 CDD:278475 49/52 (94%)
HMX family specific domain 1 251..261 7/11 (64%)
HMX family specific domain 2 264..277 12/12 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 111 1.000 Domainoid score I6236
eggNOG 1 0.900 - - E1_KOG0485
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003349
OrthoInspector 1 1.000 - - otm42352
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR46110
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4603
SonicParanoid 1 1.000 - - X983
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.940

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