DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and Hmx

DIOPT Version :10

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:XP_310605.6 Gene:Hmx / 1271752 VectorBaseID:AGAMI1_000155 Length:598 Species:Anopheles gambiae


Alignment Length:727 Identity:298/727 - (40%)
Similarity:340/727 - (46%) Gaps:270/727 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSSEAEVDISVVSSPEPSPLGAAARDSPLLARSPARSADGSSPPATPTHRSNTPNTAAGTPTTS 65
            |||.|.::|::|||||||||   ...|||              ||..|           |:....
Mosquito     7 MSSPEVDIDVNVVSSPEPSP---RPLDSP--------------PPGQP-----------GSDDEQ 43

  Fly    66 ASGGNHFHHSPSGGAV-----PPAVLHHHLQHHLSSLGSHPVALHHALHTFGHLHPAHGATHPAL 125
            .|..:..||:.||.:.     ||..|...|...|.                        |||   
Mosquito    44 RSSPDTQHHNQSGYSAPSQQQPPPSLPPPLPQQLK------------------------ATH--- 81

  Fly   126 LQHALTPTGQQQQQQLQVQQQHQQSHVERLSPPMKSPERNGGDEVQGHSLNNNNSKALNHNNTCA 190
                 :||.|||||......||.|||   |||       :||    ||      ...|.|::...
Mosquito    82 -----SPTLQQQQQPHHNHHQHHQSH---LSP-------HGG----GH------GAVLQHHSAMV 121

  Fly   191 SAAAAAAA----AAVAAA---------------------------NLSNNS---NDSNGSSGGG- 220
            :|||||||    ||.|||                           ..|:||   |.:|.||... 
Mosquito   122 AAAAAAAALHHQAAQAAAAQAAGQHGCGSYHVVGSPAAAIPPAIPAASSNSSAINSTNSSSTNSF 186

  Fly   221 ----------------------------------------------------------------- 220
                                                                             
Mosquito   187 NHSPDSRLSPPKTPPESQHQHQHHHAQQQHHQHPAHQHPPHHTHTHINQLSHQTQQQQQQQQQSP 251

  Fly   221 -GGKSTTGSNGFTSFSISSILSRSEPAKKNGAAGLITPIPQLPQPGA------------------ 266
             .||:.| :.|:|||||||||||:||..|.| .|:|||:|.||...|                  
Mosquito   252 TVGKTAT-NPGYTSFSISSILSRTEPVAKKG-LGVITPVPSLPLSAAAAAAAAAASVSNGTVSLG 314

  Fly   267 --GGP--QDAAMLSRLGFISQWGALAGRYAALCPPGWPWAP--QRLPFHSPTHDSSSTNTTENPP 325
              |.|  |||||||||||:|||.|:|.||||||||||||.|  .|:||||||:| :|||..||  
Mosquito   315 SNGTPSTQDAAMLSRLGFMSQWSAIANRYAALCPPGWPWPPTSHRMPFHSPTND-NSTNAMEN-- 376

  Fly   326 SPTSMSPNNNNNNSNTTASSNQASKSPSHHPLHPLYHPLGSQQQQQQQQQHQQHPQQQQHPQQQQ 390
                .||       :.|...:|.|||||.||..     ||.:                       
Mosquito   377 ----QSP-------SLTPPPSQQSKSPSPHPAF-----LGGR----------------------- 402

  Fly   391 QQHPHQPTTPTSSSSSGGGSSLTHHPHPHLTGSHGGYLLPSSSNESDEEGEEIIEEDDGTDGPSD 455
                       :|....||......|...:.....|.|.|....|||::|:|||||||.:|.|||
Mosquito   403 -----------ASGCGPGGPGGMGGPGTGVGPGGPGGLGPGDDCESDDDGQEIIEEDDESDRPSD 456

  Fly   456 SSSPHGDGN---SKRKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVKIWFQ 517
            |:||:.:|:   :||||||||||||||||||||||||||||||||||||||||||||||||||||
Mosquito   457 SASPNSNGSAMQAKRKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVKIWFQ 521

  Fly   518 NRRNKWKRQLAAELEAANMANMAHAAQRLVRVPVLYHDGTTAGFVPPPPPHHHPMQYY--AAARN 580
            |||||||||||||||||||||||||||||||||||||:|.|.|||||||..|....||  :|.|.
Mosquito   522 NRRNKWKRQLAAELEAANMANMAHAAQRLVRVPVLYHEGATGGFVPPPPHPHSQQLYYTTSAGRA 586

  Fly   581 TSPPRPPLSSLV 592
            .|||||||||||
Mosquito   587 GSPPRPPLSSLV 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeodomain 469..525 CDD:459649 55/55 (100%)
HmxXP_310605.6 None

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