DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and unpg

DIOPT Version :10

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:XP_308835.5 Gene:unpg / 1270160 VectorBaseID:AGAMI1_008945 Length:588 Species:Anopheles gambiae


Alignment Length:748 Identity:173/748 - (23%)
Similarity:236/748 - (31%) Gaps:318/748 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VSSPEPSPLGA---AARDSPLLARSPARSADGSSPPATPTHRSNTPNTAAGTPTTSASGGNHFHH 74
            :|:.:|:|:|:   ...|.......|:.|....:..|....||    ..||:.:.....|:|   
Mosquito     4 LSTVQPAPVGSVVCGVTDVKFSRPLPSSSFSIENLIAVKRRRS----AGAGSSSPEIDPGDH--- 61

  Fly    75 SPSGGAVPPAVLHHHLQHHLSSLGSHPVALHHALHTFGHLHPAHGATHPALLQHALTPTGQQQQQ 139
              .|...|||              :.|           ::.|.:|:        .|..|.|||  
Mosquito    62 --HGSCSPPA--------------AGP-----------NVPPGYGS--------LLLETSQQQ-- 89

  Fly   140 QLQVQQQHQQSHVERLSPPMKSPERNGGDEVQGHSLNNNNSKALNHNNTCASAAAAAAAAAVAAA 204
                ||||||.::                                         ||||||..:||
Mosquito    90 ----QQQHQQHYL-----------------------------------------AAAAAAGYSAA 109

  Fly   205 NLSNNSNDSNGSSGGGGGKSTTGSNGFTSFSISSILSRSEPAKKNGAAGLITPIPQLPQPGAGG- 268
            .||                       |:||                        |.|..|.:.| 
Mosquito   110 MLS-----------------------FSSF------------------------PPLYHPWSTGL 127

  Fly   269 PQDAAMLSRLGFISQWGALAGRYAALCPPGWPWAPQRLP---FHSPTHDSSSTNTT-----ENPP 325
            |                 .||||.:..      |.::|.   ||   |.||..|.:     |..|
Mosquito   128 P-----------------TAGRYLSQA------ANEKLSSLLFH---HHSSGGNKSHPGGIEPCP 166

  Fly   326 S--PTSMSPNNNNNN-SNTTASSNQASKS-----PSHHPL----HPLYHPLGSQQQQQQQQQHQQ 378
            .  |.:..|.:.... ..|..||.:.::|     |:...|    :.:||      .||||||.||
Mosquito   167 GTYPAAEQPQSGGGGVLPTRPSSPRGARSGDKLFPTEVDLLSKVYAVYH------HQQQQQQQQQ 225

  Fly   379 HPQ--------------------QQQHPQQQQQQHPHQPTTP--TSSSSSGGGSSLTHHPHPHLT 421
            .|:                    ...:|.....|..|||.:|  |....|.||........|  |
Mosquito   226 QPRYLTPSSPGTGYTTTGAALEPNGVNPGTGNGQLHHQPQSPGETIDPGSDGGPEDEERTRP--T 288

  Fly   422 GSHGG--------------YLLPSSSNESDEEGE---EIIEEDDGTDGPSDS----SSPHGDGNS 465
            ...||              .|.||...::.:.|:   :...|||.|...|.|    .|..|..||
Mosquito   289 IEDGGESADGSAYSDDISLTLSPSGCGKTTDLGDSDSDACSEDDCTQNSSSSGRAGKSGSGAENS 353

  Fly   466 KRKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVKIWFQNRRNKWKRQLAAE 530
            |.::: ||.|:..|:.:||..|..|:|||.:||:.:|.||:|:|.||||||||||.|||| :.|.
Mosquito   354 KSRRR-RTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKR-VKAG 416

  Fly   531 LEAANMAN---------MAHAAQRLVRVPVLYHDGTTA--------------------------- 559
            |.:..:.|         ....|.::| ||:..|....|                           
Mosquito   417 LNSHGLGNRNASGSGTGTTGTANKIV-VPIPVHVNRFAIRSQHQQMEKMNLVGPKAELRKADLGL 480

  Fly   560 ----GF------------VP---------PPPPHHHPMQYYAAARNTSPPRPPLSSLVXGVG--- 596
                ||            ||         .|.....|....|.|.:.......:.|.| |.|   
Mosquito   481 AESGGFERFGLNKHLSKVVPSAEVTSNRVDPAFSAGPTLQAAPAPSEGASNSSIESSVTGGGGAG 545

  Fly   597 --------------CLATAPMSLLKPPNSMAHP 615
                          .|.....||..||:|.:||
Mosquito   546 GGGGAGTAGIGVGFQLGMGVCSLAAPPHSASHP 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeodomain 469..525 CDD:459649 30/55 (55%)
unpgXP_308835.5 None

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