DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and LOC11175794

DIOPT Version :10

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:XP_061507321.1 Gene:LOC11175794 / 11175794 VectorBaseID:AGAMI1_004020 Length:503 Species:Anopheles gambiae


Alignment Length:588 Identity:111/588 - (18%)
Similarity:188/588 - (31%) Gaps:217/588 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 VQQQHQQSHVER-LSPPMKSPERNGGDEVQGHSLNNNNSKALNHNNTCASAAAAAAAAAVAAANL 206
            |..::|.|:... .:...:.||:         .:.|...|||.:.::..|         :..:.|
Mosquito     7 VYNEYQSSYYNSCYNYSQRGPEQ---------FIPNYYQKALQYGDSNMS---------IPQSQL 53

  Fly   207 SNNS-----------NDSNGSSGGGGGKSTTGSNGFTSFSISSILSRSEPAKKNGAAGLITPIPQ 260
            ..||           |.|:.||...|..:|...|....||.:|:.:|....:..|..        
Mosquito    54 LQNSQYAQQSQQEIQNISSISSSAYGYSATAQYNHDEQFSSNSLHTRHHQLENYGNQ-------- 110

  Fly   261 LPQPGAGGPQDAAMLSRLGFISQWGALAGRYAALCPPGWPWAPQRLPFHSPTHDS---SSTNTTE 322
                               |.|.:|                    .|:.:..|.|   :..:..|
Mosquito   111 -------------------FDSYYG--------------------YPYQTTAHYSLCGAQEHLEE 136

  Fly   323 NPPSPTSMSPNNNNNNSNTTASSNQASKSPSHHPLHPLYHPLGSQQQQQQQQQHQQHPQQQQHPQ 387
            ....||.:..:|....|  ...|.:..|.|:      :...:..::....::..........:|.
Mosquito   137 YLYKPTEVERSNVEKRS--CEKSCETIKPPA------MKRKISEKETNDNEKDSPALRALLTNPA 193

  Fly   388 QQQQQHPHQPTTPTSSSSSGGGSSLTHHPHPHLTGSHGGYLLPSSS------------NESDEEG 440
            ::.:.:||...:.|:.||....::.         |.:.|:|.|::|            |::|:..
Mosquito   194 KKLKYNPHYAHSMTNESSRRIEATF---------GYNNGFLSPAASDRIVPDIVPLSPNKTDDSI 249

  Fly   441 EEIIEED---------------------------DGTDGP-----------------SDS---SS 458
            :.:::..                           ||...|                 |:|   :|
Mosquito   250 DSLLDNSSKQDIVTMQCVDYTLNSLRQITATPKYDGVSTPPLSPKNMESAISSQGVESNSWTQNS 314

  Fly   459 PHGDGNSKRKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVKIWFQNRRNKW 523
            .|.|...:..|:||..:||.|..:||..|...|||:...|..:|:.|:|||.|:||||||||.|.
Mosquito   315 DHEDHPKESSKRTRQSYSRHQTIELEKEFHFNRYLNRRRRIEIASMLKLTERQIKIWFQNRRMKA 379

  Fly   524 KRQLAAELEAANMANMAH-------AAQRLVRVPVLYHD---------GTTAGFVPP-------- 564
            |:..:|   :||..::.:       :.:.:|.|...:|.         .|:|..|..        
Mosquito   380 KKDNSA---SANTPDLTYDGEIPQQSLESIVAVQSQHHTASDSQPLSMNTSASTVTQQVGRHCDQ 441

  Fly   565 --------PPPHHHPMQYY-------AAARNTSPPRPPLSSLVXGVGCLATAPMSLLKPPNSMAH 614
                    |..|:...|||       .:..|.....|..|.|..|                   |
Mosquito   442 QMMDGWSYPHSHYSHNQYYYMQNYSNYSQHNFQTAGPISSGLYNG-------------------H 487

  Fly   615 PPH 617
            .||
Mosquito   488 HPH 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeodomain 469..525 CDD:459649 28/55 (51%)
LOC11175794XP_061507321.1 None

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