DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and hmx1

DIOPT Version :10

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:XP_002940264.3 Gene:hmx1 / 100498485 XenbaseID:XB-GENE-6259139 Length:281 Species:Xenopus tropicalis


Alignment Length:269 Identity:111/269 - (41%)
Similarity:136/269 - (50%) Gaps:76/269 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   396 QPTTPTSSSSS----------------GGGSSLTHHPHP-HLTGSH------------------- 424
            |.||.|:..||                ..|:...||..| .|||.|                   
 Frog     9 QSTTTTARVSSFFIENLLGTESKEEKKRKGADSGHHAQPSELTGGHFSSLCCQISPYHYSYPLRE 73

  Fly   425 ----------GGYLLPSSSNESDEEGEEIIEEDDG--------TDGP---------------SDS 456
                      ..|:..:|.:.||.:..||.|..:|        ::.|               .:.
 Frog    74 NTMEWYRRAQATYIGCTSPDTSDRDSPEIAEAGEGPGRGLRKHSESPGERREDYACKEEEEEEEK 138

  Fly   457 SSPHGDGNSKRKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVKIWFQNRRN 521
            :....|..|.|||||||||||:||||||||||:||||||||||||||||.|||||||||||||||
 Frog   139 AEQDSDQRSSRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRN 203

  Fly   522 KWKRQLAAELEAANMANMAHAAQRLVRVPVLYHDGTTAGFVPPPPPHHHPMQYYAAARNTSPPRP 586
            ||||||||:|||   ||::|.:||:||||:|||:.:.|..:....||..|    |....:||...
 Frog   204 KWKRQLAADLEA---ANISHTSQRIVRVPILYHENSAATSMGFNLPHVSP----ALVGFSSPVNY 261

  Fly   587 PLSSLVXGV 595
            ||:|:. .|
 Frog   262 PLASIPNSV 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeodomain 469..525 CDD:459649 52/55 (95%)
hmx1XP_002940264.3 Homeodomain 151..207 CDD:459649 52/55 (95%)

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