DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and dbx2

DIOPT Version :10

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:XP_002932867.1 Gene:dbx2 / 100489622 XenbaseID:XB-GENE-481734 Length:251 Species:Xenopus tropicalis


Alignment Length:191 Identity:57/191 - (29%)
Similarity:76/191 - (39%) Gaps:30/191 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   393 HPHQPTT--PTSSSSSGGGSSLTH----------------HPHPHLTG-----SHGGY-LLPSSS 433
            :.|.|.|  ||....|..||:...                :||| .||     :...| .|.|:.
 Frog    59 YSHVPVTQCPTKEQFSSLGSTYPRTWTFQLLRTSDRRQPFYPHP-FTGDVYETAFSKYCYLQSAP 122

  Fly   434 NESDEEGEEIIEEDDGTDGPSDSSSP---HGDGNSKRKK--KTRTVFSRAQVFQLESTFDLKRYL 493
            ..|...|.........|..|.:...|   ..|.:||.::  ..|.|||..|...||..|..::|:
 Frog   123 FYSACCGGSCQHPASPTAFPRNEMLPPLCGQDASSKTRRVILRRAVFSEEQRKSLEKMFQKQKYI 187

  Fly   494 SSSERAGLAASLRLTETQVKIWFQNRRNKWKRQLAAELEAANMANMAHAAQRLVRVPVLYH 554
            |..:|..||.:|.|.|:||||||||||.||:......:.:........|.|:|.|.....|
 Frog   188 SKVDRKNLAVNLALKESQVKIWFQNRRMKWRNSKEKSVLSNKFLKEDSAEQKLSRTVQCIH 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeodomain 469..525 CDD:459649 28/57 (49%)
dbx2XP_002932867.1 Homeodomain 165..219 CDD:459649 28/53 (53%)

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