DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and hmx2

DIOPT Version :10

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:XP_002937849.1 Gene:hmx2 / 100486800 XenbaseID:XB-GENE-480085 Length:252 Species:Xenopus tropicalis


Alignment Length:202 Identity:95/202 - (47%)
Similarity:116/202 - (57%) Gaps:18/202 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   387 QQQQQQHPHQPTTPTSSSSSGGGSSLTHHPHPHLTGSHGGYLLPSSSNESDEEGEEIIEEDDGTD 451
            :|.:....|....|........|.:    |||     .|.:..|:.:.......::..||.| :.
 Frog    55 EQDESWRGHGCNCPDPGDKDSKGQA----PHP-----CGAHRCPNRTQMPSPSQQDYTEEKD-SH 109

  Fly   452 GPSDSSSPHGDGNSK---RKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVK 513
            .|......|.||..|   .||||||||||:||:|||||||:||||||||||.||:||:|||||||
 Frog   110 YPQSLGDRHKDGGDKMGNSKKKTRTVFSRSQVYQLESTFDMKRYLSSSERACLASSLQLTETQVK 174

  Fly   514 IWFQNRRNKWKRQLAAELEAANMANMAHA-AQRLVRVPVLYHDGTTAGFVPPPPPHHHPMQYYAA 577
            .|||||||||||||:|||||   |||||| ||.||.:|:::.|.:... ||.|.....|...|..
 Frog   175 TWFQNRRNKWKRQLSAELEA---ANMAHASAQTLVGMPLVFRDNSILR-VPVPRSIAFPAPLYYP 235

  Fly   578 ARNTSPP 584
            :.|.|.|
 Frog   236 SSNVSLP 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeodomain 469..525 CDD:459649 48/55 (87%)
hmx2XP_002937849.1 Homeodomain 130..186 CDD:459649 48/55 (87%)

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