DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and hmx2

DIOPT Version :9

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:XP_002937849.1 Gene:hmx2 / 100486800 XenbaseID:XB-GENE-480085 Length:252 Species:Xenopus tropicalis


Alignment Length:202 Identity:95/202 - (47%)
Similarity:116/202 - (57%) Gaps:18/202 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   387 QQQQQQHPHQPTTPTSSSSSGGGSSLTHHPHPHLTGSHGGYLLPSSSNESDEEGEEIIEEDDGTD 451
            :|.:....|....|........|.:    |||     .|.:..|:.:.......::..||.| :.
 Frog    55 EQDESWRGHGCNCPDPGDKDSKGQA----PHP-----CGAHRCPNRTQMPSPSQQDYTEEKD-SH 109

  Fly   452 GPSDSSSPHGDGNSK---RKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVK 513
            .|......|.||..|   .||||||||||:||:|||||||:||||||||||.||:||:|||||||
 Frog   110 YPQSLGDRHKDGGDKMGNSKKKTRTVFSRSQVYQLESTFDMKRYLSSSERACLASSLQLTETQVK 174

  Fly   514 IWFQNRRNKWKRQLAAELEAANMANMAHA-AQRLVRVPVLYHDGTTAGFVPPPPPHHHPMQYYAA 577
            .|||||||||||||:|||||   |||||| ||.||.:|:::.|.:... ||.|.....|...|..
 Frog   175 TWFQNRRNKWKRQLSAELEA---ANMAHASAQTLVGMPLVFRDNSILR-VPVPRSIAFPAPLYYP 235

  Fly   578 ARNTSPP 584
            :.|.|.|
 Frog   236 SSNVSLP 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeobox 471..524 CDD:278475 45/52 (87%)
hmx2XP_002937849.1 Homeobox 132..186 CDD:365835 46/53 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm47460
Panther 1 1.100 - - O PTHR46110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X983
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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