DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and LOC100485697

DIOPT Version :10

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:XP_002939439.1 Gene:LOC100485697 / 100485697 XenbaseID:XB-GENE-29077951 Length:266 Species:Xenopus tropicalis


Alignment Length:203 Identity:65/203 - (32%)
Similarity:84/203 - (41%) Gaps:57/203 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 YHPLGSQQQQQQQQQHQQHPQQQQHPQQQQQQH--PHQP---TTPTSSSSSG------------- 407
            |.||       .|..||...|....|......|  |..|   ..|.:.::||             
 Frog    16 YGPL-------VQMPHQTCLQPPMAPTGFSMTHCLPQNPIRTCCPGTYTNSGDLPSYQDNIRNTD 73

  Fly   408 --GGSSLTHHPHPHLTGSHGGYLLPSSSNESDEEGEEIIEEDDG-----TDGPSDSSSPHGDGNS 465
              ||:...|:|      .....:.||..|.|..          |     |:||..|.  :....|
 Frog    74 WYGGNQDMHYP------PFSRIITPSGFNVSTA----------GCLGYLTEGPKHSL--YLQHTS 120

  Fly   466 KRKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVKIWFQNRRNKWKRQL--- 527
            |||:  |.:||:|||::||..|:.::||::.||..||..:.||..||||||||.|.|.|||.   
 Frog   121 KRKR--RVLFSQAQVYELEKRFEHQKYLTAPEREQLAKHIHLTPNQVKIWFQNHRYKMKRQARNH 183

  Fly   528 --AAELEA 533
              .||.||
 Frog   184 DPLAEEEA 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeodomain 469..525 CDD:459649 27/55 (49%)
LOC100485697XP_002939439.1 Homeodomain 122..178 CDD:459649 29/57 (51%)

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