DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and dlx1

DIOPT Version :9

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_001093727.1 Gene:dlx1 / 100101750 XenbaseID:XB-GENE-876850 Length:251 Species:Xenopus tropicalis


Alignment Length:297 Identity:81/297 - (27%)
Similarity:117/297 - (39%) Gaps:95/297 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 TNTTENPPSPTS-------MSPNNNNNNSNTTASSNQASKSP---SHHPLHPLYHPLGSQQQQQQ 372
            |:..|:..||.|       ..|.|           .|...||   .|:.:|.|            
 Frog     4 TSMPESLSSPVSGKAVFMEFGPPN-----------QQMPPSPMSHGHYSMHCL------------ 45

  Fly   373 QQQHQQHPQQQQHPQQQQQQHPHQPTTPTSSSSSGGGSSLTH---HPHPHLTGSHGG--YL---- 428
               |.||                       .||..|.||.:.   :|:.:...||..  |:    
 Frog    46 ---HSQH-----------------------DSSYSGASSFSRALGYPYVNSVSSHSSNPYISTVQ 84

  Fly   429 -LPSSSNES----DEEGEEIIEEDDGTDGPSDSSSPHGDGNSKRKKKTRTVFSRAQVFQLESTFD 488
             .|:||:.|    :|.|.| .|:....:|    .....:|..|:.:|.||::|..|:..|...|.
 Frog    85 SYPNSSSLSQTRLEEPGAE-TEKSTVVEG----GEVRFNGKGKKIRKPRTIYSSLQLQALNRRFQ 144

  Fly   489 LKRYLSSSERAGLAASLRLTETQVKIWFQNRRNKWK---RQLAAELEAANMANMAHAAQRLVRVP 550
            ..:||:..|||.|||||.||:|||||||||:|:|:|   :|..|.||::.:||....:.....|.
 Frog   145 QTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMKQGGAALESSALANGRSLSSSSPSVA 209

  Fly   551 VLYH---------DGTTAGFVPP-----PPPHHHPMQ 573
            .:::         .||...::|.     |..|...||
 Frog   210 PVWNTNTPSGKTSSGTPGAYIPSYTSWYPSAHQEAMQ 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeobox 471..524 CDD:278475 29/52 (56%)
dlx1NP_001093727.1 Homeobox 127..181 CDD:365835 29/53 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D574097at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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