DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and not

DIOPT Version :10

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_001164669.1 Gene:not / 100038059 XenbaseID:XB-GENE-478518 Length:236 Species:Xenopus tropicalis


Alignment Length:85 Identity:36/85 - (42%)
Similarity:53/85 - (62%) Gaps:7/85 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   456 SSSPHGDGNSK-------RKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVK 513
            |..|:|..|..       :.|:.||||:..|:.:||..|..::|:..:||..||::|.|||||||
 Frog   119 SHCPNGSMNPLSWRTGPCKMKRIRTVFTPEQLERLEKEFLKQQYMVGTERVDLASTLNLTETQVK 183

  Fly   514 IWFQNRRNKWKRQLAAELEA 533
            :||||||.||::|...:.:|
 Frog   184 VWFQNRRIKWRKQSLEQKKA 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeodomain 469..525 CDD:459649 30/55 (55%)
notNP_001164669.1 Homeodomain 139..195 CDD:459649 30/55 (55%)

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