DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and barhl2

DIOPT Version :9

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_991303.1 Gene:barhl2 / 100001699 ZFINID:ZDB-GENE-050913-153 Length:364 Species:Danio rerio


Alignment Length:374 Identity:115/374 - (30%)
Similarity:142/374 - (37%) Gaps:92/374 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 SSTNTTENPPSPTSMSPNNN---NNNSNTTASSNQASKSPSHH-------PLHP----LYHPLGS 366
            |:||      |.||:..|.:   .::|.|....:||:.||...       |..|    :.||...
Zfish    16 STTN------SGTSVLMNGDFRLGDSSRTADFRSQATPSPCSEIDTVGTAPSSPISVTMEHPEPH 74

  Fly   367 QQQQQQQQQHQQHPQQQQHPQQQQQQ---HPH-------QPTTPTSS----SSSGGGSSL----- 412
            ..|...|..|..|    .|.|.|..|   .||       .|.|.|||    ...|....|     
Zfish    75 LVQDSLQHHHHHH----HHSQAQSLQLSPQPHLLGQAGCAPRTATSSFLIKDILGDSKPLAACAP 135

  Fly   413 --THHPHPHLTGSHGGYLLPSSSN---ESDEEGEEIIEEDD---------GTDGPSD----SSSP 459
              |..|.||.:........|....   |.||...::.:.||         ||....|    ||..
Zfish   136 YSTSVPSPHHSPKTESGTAPDGIRPKLEQDENRSKLDKRDDIQSDLKCLNGTKEEGDREISSSRD 200

  Fly   460 HGDGNSKRKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVKIWFQNRRNKWK 524
            .....||:.:|.||.||..|:.|||.:|:.::|||..:|..|||:|.||:||||.|:||||.|||
Zfish   201 SPPVRSKKPRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWK 265

  Fly   525 RQLAAELEAANMANMAHAAQRLVRVPVLYH-------DGTTAGFVPPPPPHHHPMQYYAAARNTS 582
            ||.|..||....|....|.||:...|..||       |.|||....       ...|.:..|..|
Zfish   266 RQTAVGLELLAEAGNYSALQRMFPSPYFYHPSLLGTVDSTTAAAAA-------AAMYSSMYRTPS 323

  Fly   583 PPRPPLSS------LVXGVGCLATAPMSLLKPPNSMAHPPHPQPPPPAP 625
            .|.|.|..      |: |:|           |....|..|.|.|.|..|
Zfish   324 TPHPSLQRPLVPRVLIHGLG-----------PGGQPALNPIPNPIPGTP 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeobox 471..524 CDD:278475 29/52 (56%)
barhl2NP_991303.1 COG5576 <190..299 CDD:227863 49/108 (45%)
Homeobox 213..265 CDD:278475 29/51 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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