DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prx3 and prdx1

DIOPT Version :10

Sequence 1:NP_524387.1 Gene:Prx3 / 42109 FlyBaseID:FBgn0038519 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_001013489.2 Gene:prdx1 / 541344 ZFINID:ZDB-GENE-050320-35 Length:199 Species:Danio rerio


Alignment Length:192 Identity:117/192 - (60%)
Similarity:145/192 - (75%) Gaps:3/192 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 VQQPAPDFKGLAVV-DNSFQEVKLEDYRGKYLVLFFYPLDFTFVCPTEIVAFSERIKEFHDINTE 105
            :.:|||||...||: |..|.:|:|.||:|||:|||||||||||||||||:|||:..:||..||.|
Zfish     8 IGKPAPDFTAKAVMPDGQFGDVRLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSDAAEEFRKINCE 72

  Fly   106 VLGVSVDSHFSHLTWCNVDRKNGGVGQLKYPLLSDLTKKISADYDVLLDKEGISLRGTFIIDPNG 170
            ::|.||||||.||.|....||.||:|.:..||::|..:.||.||.||.:.|||:.||.||||..|
Zfish    73 IIGASVDSHFCHLAWTKTPRKQGGLGPMNVPLVADTLRSISKDYGVLKEDEGIAYRGLFIIDDKG 137

  Fly   171 ILRQYSINDLPVGRSVDEVLRLIKAFQFVEQHGEVCPANWNPNSNPATIKPDVEESKKYFSK 232
            ||||.:|||||||||:||.|||::||||.::|||||||.|.|..:  ||||||.:||.:|||
Zfish   138 ILRQITINDLPVGRSIDETLRLVQAFQFTDKHGEVCPAGWKPGKD--TIKPDVNQSKDFFSK 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prx3NP_524387.1 PRX_Typ2cys 42..212 CDD:239313 105/170 (62%)
1-cysPrx_C 195..232 CDD:431271 22/36 (61%)
prdx1NP_001013489.2 PRX_Typ2cys 8..180 CDD:239313 105/171 (61%)

Return to query results.
Submit another query.