DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prx3 and prdx6

DIOPT Version :10

Sequence 1:NP_524387.1 Gene:Prx3 / 42109 FlyBaseID:FBgn0038519 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_957099.1 Gene:prdx6 / 393778 ZFINID:ZDB-GENE-040426-1778 Length:222 Species:Danio rerio


Alignment Length:203 Identity:54/203 - (26%)
Similarity:98/203 - (48%) Gaps:31/203 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 PDFKGLAVVDNSFQEVKLEDYRG-KYLVLFFYPLDFTFVCPTEIVAFSERIKEFHDINTEVLGVS 110
            |:|:    .|.:..::|..::.| .:.:||.:|.|||.||.||:...::..:||...:.:::.:|
Zfish    11 PNFE----ADTTIGKIKFHEFLGNSWGILFSHPRDFTPVCTTELARAAKLHEEFKKRDVKMIALS 71

  Fly   111 VDSHFSHLTWC------NVDRKNGGVGQLKYPLLSDLTKKISADYDVLL--------DKEGISL- 160
            :||...|..|.      |.|:   ....:.:|:::|..:::|    |||        ||:|:.| 
Zfish    72 IDSVEDHRKWSEDILAFNQDK---ACCPMPFPIIADDKRELS----VLLGMLDPDERDKDGMPLT 129

  Fly   161 -RGTFIIDPNGILRQYSINDLPVGRSVDEVLRLIKAFQFVEQHGEVCPANWNPNSNPATIKPDV- 223
             |..|::.|:..|:...:.....||:.||:||::.:.|.........|.:|.|......| |.: 
Zfish   130 ARCVFVVGPDKRLKLSILYPATTGRNFDEILRVVDSLQLTATKKVATPVDWKPGQEVMVI-PSLS 193

  Fly   224 -EESKKYF 230
             ||:.|.|
Zfish   194 DEEANKLF 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prx3NP_524387.1 PRX_Typ2cys 42..212 CDD:239313 47/181 (26%)
1-cysPrx_C 195..232 CDD:431271 10/38 (26%)
prdx6NP_957099.1 PRX_1cys 6..221 CDD:239314 54/203 (27%)

Return to query results.
Submit another query.