DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prx3 and CG12896

DIOPT Version :9

Sequence 1:NP_524387.1 Gene:Prx3 / 42109 FlyBaseID:FBgn0038519 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_610584.2 Gene:CG12896 / 36101 FlyBaseID:FBgn0033521 Length:220 Species:Drosophila melanogaster


Alignment Length:207 Identity:69/207 - (33%)
Similarity:109/207 - (52%) Gaps:21/207 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 VRVQQPAPDFKGLAVVDNSFQEVKLEDYRG-KYLVLFFYPLDFTFVCPTEIVAFSERIKEFHDIN 103
            :|:.|..|:|:    .|.:...:|..:::| .::|||.:|.|||.||.||:...:....||...|
  Fly     1 MRLGQTVPNFE----ADTTKGPIKFHEWQGNSWVVLFSHPADFTPVCTTELGRIAVHQPEFAKRN 61

  Fly   104 TEVLGVSVDSHFSHLTWCNVDRKNGGV---GQLKYPLLSDLTKKISADYDVLLDKE-------GI 158
            |:.|..|||:..||:.|.| |.|:..:   |...||:::|.|:.::.... :||:|       |.
  Fly    62 TKCLAHSVDALNSHVDWVN-DIKSYCLDIPGDFPYPIIADPTRDLAVTLG-MLDEEQKKDPEVGK 124

  Fly   159 SLRGTFIIDPNGILRQYSINDLPVGRSVDEVLRLIKAFQFVEQHGEVC-PANWNPNSNPATIKPD 222
            ::|..|||.|:..:|......:..||:|||:||.|.:.|..::...|. ||||.|.:. ..|.|.
  Fly   125 TIRALFIISPDHKVRLSMFYPMSTGRNVDEILRTIDSLQLTDRLKVVATPANWTPGTK-VMILPS 188

  Fly   223 V--EESKKYFSK 232
            |  :|:.|.|.|
  Fly   189 VTDDEAHKLFPK 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prx3NP_524387.1 AhpC 40..233 CDD:223527 69/207 (33%)
PRX_Typ2cys 42..212 CDD:239313 60/181 (33%)
1-cysPrx_C 195..232 CDD:287400 13/39 (33%)
CG12896NP_610584.2 AhpC 1..194 CDD:223527 65/199 (33%)
PRX_1cys 3..218 CDD:239314 68/205 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446118
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0450
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100111
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.640

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