DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prx3 and Prx2540-2

DIOPT Version :9

Sequence 1:NP_524387.1 Gene:Prx3 / 42109 FlyBaseID:FBgn0038519 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_523683.1 Gene:Prx2540-2 / 36098 FlyBaseID:FBgn0033518 Length:220 Species:Drosophila melanogaster


Alignment Length:207 Identity:70/207 - (33%)
Similarity:109/207 - (52%) Gaps:21/207 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 VRVQQPAPDFKGLAVVDNSFQEVKLEDYRG-KYLVLFFYPLDFTFVCPTEIVAFSERIKEFHDIN 103
            :|:.|..|:|:    .|.:...:|..:::| .::|||.:|.|||.||.||:...:....||...|
  Fly     1 MRLGQTVPNFE----ADTTKGPIKFHEWQGNSWVVLFSHPADFTPVCTTELGRIAVHQPEFAKRN 61

  Fly   104 TEVLGVSVDSHFSHLTWCNVDRKNGGV---GQLKYPLLSDLTKKISADYDVLLDKE-------GI 158
            |:.|..|||:..||:.|.| |.|:..:   |...||:::|.|:.::.... :||:|       |.
  Fly    62 TKCLAHSVDALNSHVDWVN-DIKSYCLDIPGDFPYPIIADPTRDLAVSLG-MLDEEQKKDPEVGK 124

  Fly   159 SLRGTFIIDPNGILRQYSINDLPVGRSVDEVLRLIKAFQFVEQHGEVC-PANWNPNSNPATIKPD 222
            ::|..|||.|:..:|......:..||:|||:||.|.:.|..::...|. ||||.|.:. ..|.|.
  Fly   125 TIRALFIISPDHKVRLSMFYPMSTGRNVDEILRTIDSLQLTDRLKVVATPANWTPGTK-VMILPT 188

  Fly   223 V--EESKKYFSK 232
            |  ||:.|.|.|
  Fly   189 VTDEEAHKLFPK 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prx3NP_524387.1 AhpC 40..233 CDD:223527 70/207 (34%)
PRX_Typ2cys 42..212 CDD:239313 60/181 (33%)
1-cysPrx_C 195..232 CDD:287400 14/39 (36%)
Prx2540-2NP_523683.1 AhpC 1..194 CDD:223527 66/199 (33%)
PRX_1cys 3..218 CDD:239314 69/205 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446119
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0450
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100111
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.640

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