DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5823 and UBC34

DIOPT Version :10

Sequence 1:NP_650631.1 Gene:CG5823 / 42105 FlyBaseID:FBgn0038515 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_001321631.1 Gene:UBC34 / 838300 AraportID:AT1G17280 Length:243 Species:Arabidopsis thaliana


Alignment Length:180 Identity:82/180 - (45%)
Similarity:123/180 - (68%) Gaps:6/180 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QPTAVSRMKQDYMRLKRDPLPYITAEPLPNNILEWHYCVKGPEDSPYYGGYYHGTLLFPREFPFK 76
            :...:.|::::|..|.::|:.::.|.|.||:||||||.::|.|.:|:.||:|:|.:.||.|:|:|
plant     3 EKACIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYK 67

  Fly    77 PPSIYMLTPNGRFKTNTRLCLSISDF------HPDTWNPTWCVGTILTGLLSFMLESTPTLGSIE 135
            ||.|.|.||||||.|..::|||:|||      ||::|||.|.|.:|||||||||::::||.||:.
plant    68 PPGITMTTPNGRFMTQKKICLSMSDFDMAFTVHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVN 132

  Fly   136 SSNYDKQMFAQKSLAFNLRNTNFCELFPEIVEEIKQRLRGTQAAAAVDGP 185
            ::..:||..|:.|||||.:...|.:||||.||:..|:....||...:..|
plant   133 TTVIEKQRLAKSSLAFNCKTPAFRKLFPEYVEKYNQQQLAEQATTQLTTP 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5823NP_650631.1 UBCc_UBE2J 18..149 CDD:467419 66/136 (49%)
UBC34NP_001321631.1 UBCc_UBE2J 8..146 CDD:467419 66/137 (48%)

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