DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5823 and ube2j1

DIOPT Version :9

Sequence 1:NP_001262669.1 Gene:CG5823 / 42105 FlyBaseID:FBgn0038515 Length:283 Species:Drosophila melanogaster
Sequence 2:XP_012818393.1 Gene:ube2j1 / 496585 XenbaseID:XB-GENE-958459 Length:327 Species:Xenopus tropicalis


Alignment Length:304 Identity:94/304 - (30%)
Similarity:145/304 - (47%) Gaps:64/304 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KQPTAVSRMKQDYMRLKRDPLPYITAEPLPNNILEWHYCVKGPEDSPYYGGYYHGTLLFPREFPF 75
            |.| ||.|:.::...| |||..:..|:||.:|:.|||:.|:||.||.:.||.|||.::.|.|:|.
 Frog    30 KSP-AVKRLMKEAAEL-RDPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPM 92

  Fly    76 KPPSIYMLTPNGRFKTNTRLCLSISDFHPDTWNPTWCVGTILTGLLSFMLESTPT-----LGSIE 135
            |||||.:||.||||:...::|||||..||:||.|:|.:.|.|..::.||    ||     :||::
 Frog    93 KPPSIILLTANGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFM----PTKGEGAIGSLD 153

  Fly   136 SSNYDKQMFAQKSLAF-------NLRNTNFCELFP------EIVEEIKQRLRGTQAAAAVDGPAA 187
            .:..:::..|::|..:       |::    |.|.|      :...|.::..|.....|.|:.|  
 Frog   154 YTPEERKALAKRSQDYFCEVCGVNMK----CTLLPLSSSSSQADVEARELARQISFKAEVNPP-- 212

  Fly   188 NGVKRSNGLANGA-------------------SLASADGNLAVGGLANP----LNAADAIDGGAA 229
                   |.|.||                   ...:||.:.:.|...:|    .|.:.:.....|
 Frog   213 -------GSAQGAENPPNQSPETMEPNAHTHHETEAADASTSAGQETSPPTPSTNVSRSPRQRRA 270

  Fly   230 GQADL-ASGGGAAVQNSARNSYLNWQSVYSNLVIIICFAIFALI 272
            .|..: ||.|...||..|.|......:|   |::::..|:.|||
 Frog   271 QQRRIPASTGLIQVQQHAVNGSNTGSAV---LIVVLTLALAALI 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5823NP_001262669.1 UBCc 16..129 CDD:238117 52/112 (46%)
ube2j1XP_012818393.1 UBCc 34..>141 CDD:238117 50/107 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1230974at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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