DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5823 and Ubc84D

DIOPT Version :10

Sequence 1:NP_650631.1 Gene:CG5823 / 42105 FlyBaseID:FBgn0038515 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_524260.1 Gene:Ubc84D / 40900 FlyBaseID:FBgn0017456 Length:153 Species:Drosophila melanogaster


Alignment Length:118 Identity:33/118 - (27%)
Similarity:49/118 - (41%) Gaps:11/118 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VSRMKQDYMRLKRDPLPYITAEPLPNNILEWHYCVKGPEDSPYYGGYYHGTLLFPREFPFKPPSI 80
            ::|...|.:..|...|..|  |....::|.|...:. ||.:||..|.:...:.||.::||.||.|
  Fly     7 LTRELSDLVEAKMSTLRNI--ESSDESLLMWTGLLV-PEKAPYNKGAFRIEINFPPQYPFMPPKI 68

  Fly    81 YMLT----PNGRFKTNTRLCLSISDFHPDTWNPTWCVGTILTGLLSFMLESTP 129
            ...|    ||  ......:||.|  ...|.|.||.....:|..|::.:....|
  Fly    69 LFKTKIYHPN--VDEKGEVCLPI--ISTDNWKPTTRTEQVLQALVAIVHNPEP 117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5823NP_650631.1 UBCc_UBE2J 18..149 CDD:467419 33/116 (28%)
Ubc84DNP_524260.1 UBCc_UBE2L3 3..149 CDD:467421 33/118 (28%)

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