DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5823 and ube2j1

DIOPT Version :10

Sequence 1:NP_650631.1 Gene:CG5823 / 42105 FlyBaseID:FBgn0038515 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_999932.1 Gene:ube2j1 / 406794 ZFINID:ZDB-GENE-040426-2853 Length:314 Species:Danio rerio


Alignment Length:257 Identity:83/257 - (32%)
Similarity:130/257 - (50%) Gaps:42/257 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KQPTAVSRMKQDYMRLKRDPLPYITAEPLPNNILEWHYCVKGPEDSPYYGGYYHGTLLFPREFPF 75
            |.| ||.|:.::...| |||..:..|:||.:|:.|||:.|:||.||.:.||.|||.::.|.|:|.
Zfish     8 KSP-AVKRLMKEAAEL-RDPTEHYHAQPLEDNLFEWHFSVRGPPDSDFDGGVYHGRIVLPPEYPM 70

  Fly    76 KPPSIYMLTPNGRFKTNTRLCLSISDFHPDTWNPTWCVGTILTGLLSFMLESTPT-----LGSIE 135
            |||||.:|||||||:...::|||||..||:||.|:|.:.|.|..::.||    ||     :||::
Zfish    71 KPPSIILLTPNGRFEVGKKICLSISGHHPETWQPSWSIRTALIAIIGFM----PTKGEGAIGSLD 131

  Fly   136 SSNYDKQMFAQKSLAFNLRNTNFC------------ELFPEIVEEIKQRL--RGTQAAAAVDGPA 186
            .:..:::..|:||..|.....:.|            :|.|...:.:.|::  :...:::|.|..:
Zfish   132 YTPEERKALAKKSQDFCCEACSSCMRSALLPLSPDSDLRPADPQRLAQQINFKAESSSSAADSSS 196

  Fly   187 ANGVKRSNGLANGASLASADGNLAVGGLANPLNAADAIDGGAAGQADLASGGGAAVQNSARN 248
            ::............|..:||              .|..|..||.|.:.:|   .|.|.||.:
Zfish   197 SSSAAAEVFSNTSESSETAD--------------QDTEDTSAAEQTESSS---VAPQTSAED 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5823NP_650631.1 UBCc_UBE2J 18..149 CDD:467419 58/135 (43%)
ube2j1NP_999932.1 UBCc_UBE2J 13..145 CDD:467419 58/136 (43%)
PRK13335 <208..>283 CDD:139494 13/51 (25%)

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