DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5823 and UbcE2M

DIOPT Version :9

Sequence 1:NP_001262669.1 Gene:CG5823 / 42105 FlyBaseID:FBgn0038515 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_001261567.1 Gene:UbcE2M / 38916 FlyBaseID:FBgn0035853 Length:181 Species:Drosophila melanogaster


Alignment Length:130 Identity:36/130 - (27%)
Similarity:55/130 - (42%) Gaps:23/130 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RKQPTAVSRMKQDYMRLKRDPLPYITAE--PLPNNILEWHYCVKGPEDSPYYGGYYHGTLLF--- 69
            :|...|..|:::|...|.   ||...|.  |.||::|.:...:     ||..|.|..|..:|   
  Fly    22 KKASAAQLRIQKDINELN---LPNTCATDFPDPNDLLNFKLII-----SPDEGFYRDGRFVFNFR 78

  Fly    70 -PREFPFKPPSIYMLT----PNGRFKTNTRLCLSISDFHPDTWNPTWCVGTILTGLLSFMLESTP 129
             ...:|.:||.:...|    ||  ...:..:||:|.   .:.|||...:.:|:.||....||..|
  Fly    79 VGSNYPHEPPKVKCATQVYHPN--IDLDGNVCLNIL---REDWNPVLNINSIVYGLQFLFLEPNP 138

  Fly   130  129
              Fly   139  138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5823NP_001262669.1 UBCc 16..129 CDD:238117 33/122 (27%)
UbcE2MNP_001261567.1 UQ_con 30..165 CDD:395127 34/122 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438191
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24068
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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