DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5823 and CG17030

DIOPT Version :9

Sequence 1:NP_001262669.1 Gene:CG5823 / 42105 FlyBaseID:FBgn0038515 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_647941.1 Gene:CG17030 / 38591 FlyBaseID:FBgn0035584 Length:180 Species:Drosophila melanogaster


Alignment Length:92 Identity:30/92 - (32%)
Similarity:46/92 - (50%) Gaps:5/92 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 PNNILEWHYCVKGPEDSPYYGGYYHGTLLFPREFPFKPPSIYMLTPNGRFKTNTR--LCLSISDF 102
            ||||.:|...:. |...||..|.|...:.||.::|||||.|::.|.......|.|  :|:.|.:.
  Fly    38 PNNIYKWTGLLM-PVAPPYDKGAYKMEIDFPLDYPFKPPRIHINTRMYHLNVNERGQVCVPILEV 101

  Fly   103 HPDTWNPTWCVGTILTGLLSFMLESTP 129
              :.|.||..:..:|..||:.:.:..|
  Fly   102 --EHWIPTTRIDQVLQVLLATINDPQP 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5823NP_001262669.1 UBCc 16..129 CDD:238117 29/90 (32%)
CG17030NP_647941.1 COG5078 12..158 CDD:227410 30/92 (33%)
UQ_con 14..153 CDD:278603 30/92 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24068
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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