DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5823 and CG10862

DIOPT Version :9

Sequence 1:NP_001262669.1 Gene:CG5823 / 42105 FlyBaseID:FBgn0038515 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_647823.1 Gene:CG10862 / 38437 FlyBaseID:FBgn0035455 Length:354 Species:Drosophila melanogaster


Alignment Length:135 Identity:36/135 - (26%)
Similarity:61/135 - (45%) Gaps:18/135 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSSSTSGGRKQPTAVSRMKQDYMRLKRDPLPYITAEPLPNNILEWHYCVKGPEDSPYYGGYYHGT 66
            |...|.|   .|..::|::::......|......||.:.:|:..|...:.||.::.|.||.:...
  Fly   199 SGIPTQG---DPLTITRLRREISEFSTDQTEGCKAEMVGDNLFHWVATIPGPSETVYEGGRFRVE 260

  Fly    67 LLFPREFPFKPPSIYMLTPNGRFKT-------NTRLCLSISDFHPDTWNPTWCVGTILTGLLSFM 124
            ::|||.:||.||.:..||     ||       :.|:||   |.....|:|...|..:|..::|.:
  Fly   261 IVFPRNYPFYPPYLAFLT-----KTYHCNIALSGRICL---DILGSKWSPALSVSKVLISIMSLL 317

  Fly   125 LESTP 129
            .:..|
  Fly   318 ADPNP 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5823NP_001262669.1 UBCc 16..129 CDD:238117 31/119 (26%)
CG10862NP_647823.1 COG5078 207..354 CDD:227410 33/124 (27%)
UQ_con 212..349 CDD:278603 32/119 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24068
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.