DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5823 and Kua

DIOPT Version :9

Sequence 1:NP_001262669.1 Gene:CG5823 / 42105 FlyBaseID:FBgn0038515 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_001188856.1 Gene:Kua / 35300 FlyBaseID:FBgn0032850 Length:310 Species:Drosophila melanogaster


Alignment Length:154 Identity:30/154 - (19%)
Similarity:53/154 - (34%) Gaps:42/154 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 YMRLKRDPLPYITA------EPLPNNILEWHYCVKGPEDSPYYGGYYHGTLLFP-REFPFKPPSI 80
            ::||:|..:.:::|      ....:.::.|.....|..|.|..|..:    |.| ||....|.||
  Fly   107 HLRLERISVAFLSALCGIITADFASGLVHWAADTWGSVDIPMIGKNF----LRPFREHHLDPTSI 167

  Fly    81 YMLTPNGRFKTNTRLCLSISDFHPDTWNPTWCVGTILTGLLSFMLESTPTLGSIESSNYDKQMFA 145
               |.:...:||               ...:.||..:.|.|:...       .|.:.:..:|.|.
  Fly   168 ---TRHDFIETN---------------GDNFMVGIPILGYLAHYF-------YIRTPSEIQQHFG 207

  Fly   146 QKSLAFNLRNTNFCELFPEIVEEI 169
            ..:..|      .|.:|..:..:|
  Fly   208 WIAYVF------LCSIFVAMTNQI 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5823NP_001262669.1 UBCc 16..129 CDD:238117 23/112 (21%)
KuaNP_001188856.1 TMEM189_B_dmain 124..301 CDD:287490 26/137 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438141
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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