DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5823 and CG4502

DIOPT Version :9

Sequence 1:NP_001262669.1 Gene:CG5823 / 42105 FlyBaseID:FBgn0038515 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_609103.1 Gene:CG4502 / 34002 FlyBaseID:FBgn0031896 Length:306 Species:Drosophila melanogaster


Alignment Length:119 Identity:29/119 - (24%)
Similarity:49/119 - (41%) Gaps:26/119 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RMKQDY-----MRLKRDPLPYITAEPLPNNILEWH--YCVKGPEDSPYYGG---------YYHGT 66
            |:.::|     ::.|.|.:  .|.|.:.:::.|||  ..|..| |||....         ..|  
  Fly   142 RLMKEYREMERLQAKNDAV--FTVELVNDSLFEWHVRLHVIDP-DSPLARDMAEMGVPAILLH-- 201

  Fly    67 LLFPREFPFKPPSIYMLTPN---GRFKTNTRLCLSISDFHPDTWNPTWCVGTIL 117
            |.||..|||.||.:.::.|:   |.......:|:.:  ..|..|...:.|..::
  Fly   202 LSFPDNFPFAPPFMRVVEPHIEKGYVMEGGAICMEL--LTPRGWASAYTVEAVI 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5823NP_001262669.1 UBCc 16..129 CDD:238117 29/119 (24%)
CG4502NP_609103.1 UBCc 140..>258 CDD:238117 29/119 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24068
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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