DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5823 and CG8188

DIOPT Version :10

Sequence 1:NP_650631.1 Gene:CG5823 / 42105 FlyBaseID:FBgn0038515 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_573237.2 Gene:CG8188 / 32751 FlyBaseID:FBgn0030863 Length:209 Species:Drosophila melanogaster


Alignment Length:158 Identity:33/158 - (20%)
Similarity:63/158 - (39%) Gaps:17/158 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSSSTSGGRKQPTAVSRMKQDYMRLKRDPLPYITAEPLPNNILEWHYCVKGPEDSPYYGGYYHG 65
            |||..::.....|..:.::.::...::..|...|......:::.:....:.||..:||..|.:..
  Fly     1 MSSQYSNVENLSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRV 65

  Fly    66 TLLFPREFPFKPPSIYMLT----PNGRFKTNTRLCLSISDFHPDTWNPTWCVGTILTGLLSFMLE 126
            .|...::||..||..|.||    ||  ...|..:|  ::....| |.|...:..||..:...::.
  Fly    66 KLTLNKDFPLTPPKAYFLTKIFHPN--VAANGEIC--VNTLKKD-WKPDLGIKHILLTIKCLLIV 125

  Fly   127 STP------TLGSIESSNYDKQMFAQKS 148
            ..|      ..|.:....||.  ::|::
  Fly   126 PNPESALNEEAGKMLLERYDD--YSQRA 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5823NP_650631.1 UBCc_UBE2J 18..149 CDD:467419 29/141 (21%)
CG8188NP_573237.2 UBCc_UBE2S 13..158 CDD:467424 30/146 (21%)

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