DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5823 and ubc6

DIOPT Version :9

Sequence 1:NP_001262669.1 Gene:CG5823 / 42105 FlyBaseID:FBgn0038515 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_593256.1 Gene:ubc6 / 2541642 PomBaseID:SPAC10F6.05c Length:227 Species:Schizosaccharomyces pombe


Alignment Length:206 Identity:87/206 - (42%)
Similarity:133/206 - (64%) Gaps:9/206 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 AVSRMKQDYMRLKRDPLPYITAEPLPNNILEWHYCVKGPEDSPYYGGYYHGTLLFPREFPFKPPS 79
            |..|:.::|:.|:::|:..:.|:|...|||||||.:.||.|:||.||.|||||:||.::|||||:
pombe     6 AYKRLMKEYLALQKNPVELVDAKPATENILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFKPPA 70

  Fly    80 IYMLTPNGRFKTNTRLCLSISDFHPDTWNPTWCVGTILTGLLSFMLESTPTLGSIESSNYDKQMF 144
            |.|:||:|||:||||||||.|||||.:|||:|.|.|||.||:|||.....|.|.|.:|...::.:
pombe    71 IRMITPSGRFQTNTRLCLSFSDFHPKSWNPSWMVSTILVGLVSFMTSDEITTGGIVTSESTRRTY 135

  Fly   145 AQKSLAFNLR-NTNFCELFPEIVEEIKQRLRGTQAAAAVDGP--------AANGVKRSNGLANGA 200
            |:.:..||:. |..|..:|||::::.::.:....|.||:..|        ::|..|::....:..
pombe   136 AKDTKRFNIMDNPKFLIMFPELIDKNREDIAKAAAEAALIEPQQIHSTPVSSNECKKNEPFNSKQ 200

  Fly   201 SLASADGNLAV 211
            |...:..::||
pombe   201 SWVKSRWSIAV 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5823NP_001262669.1 UBCc 16..129 CDD:238117 65/112 (58%)
ubc6NP_593256.1 COG5078 1..154 CDD:227410 75/147 (51%)
UBCc 7..120 CDD:238117 65/112 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 160 1.000 Domainoid score I987
eggNOG 1 0.900 - - E1_KOG0894
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10975
Inparanoid 1 1.050 185 1.000 Inparanoid score I1089
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004329
OrthoInspector 1 1.000 - - oto100617
orthoMCL 1 0.900 - - OOG6_101978
Panther 1 1.100 - - LDO PTHR24068
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1584
SonicParanoid 1 1.000 - - X3056
TreeFam 1 0.960 - -
1312.850

Return to query results.
Submit another query.