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Protein Alignment Dscam3 and PAPLN

DIOPT Version :9

Sequence 1:	NP_996226.2	Gene:	Dscam3 / 42103	FlyBaseID:	FBgn0261046	Length:	2087	Species:	Drosophila melanogaster
Sequence 2:	NP_001352835.1	Gene:	PAPLN / 89932	HGNCID:	19262	Length:	1278	Species:	Homo sapiens

Alignment Length:	360	Identity:	87/360 - (24%)
Similarity:	139/360 - (38%)	Gaps:	93/360 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly   432 LKLGDTVPELIYTFIEQNVRPGPLISLKCSASGSPPPQFAWLLDSQPIMDVSLHHRFAIGQFVDM 496
            :.|....|.|:...:      |.|:.|.||...:|..|.||..|.|||.  |..||.   ||
Human   909 ISLAGVEPSLVQAAL------GQLVRLSCSDDTAPESQAAWQKDGQPIS--SDRHRL---QF--- 959

  Fly   497 SGDVISHLNISHVRPDDGGLYKCVASNSMGSVQHSARLNVYGP-------------PYVR----- 543
            .|.:|.|    .::.:|.|.|.| .|...|......:|.:.|.             |..|
Human   960 DGSLIIH----PLQAEDAGTYSC-GSTRPGRDSQKIQLRIIGGDMAVLSEAELSRFPQPRDPAQD 1019

  Fly   544 -----AIGPIKAV------------------------AGEDIIVHCPFAGYPVEQIRWEKAHQEL 579
                 |.||:.|:                        .|:.|.:.|...|:|...|.|::..|.:
Human  1020 FGQAGAAGPLGAIPSSHPQPANRLRLDQNQPRVVDASPGQRIRMTCRAEGFPPPAIEWQRDGQPV 1084

  Fly   580 TTSNHYELASVADGGQLVIKNVEPGRDQGIYTCIVRSRAGEEA-RRDMQLNV-------NSPPVI 636
            ::..|    .:...|.|||..|.. .|.|.|||:..:  |::. :|.:||.|       ..||.:
Human  1085 SSPRH----QLQPDGSLVISRVAV-EDGGFYTCVAFN--GQDRDQRWVQLRVLGELTISGLPPTV 1142

  Fly   637 EPFKFPKNLQEGGRAQITCAVSSGDMPIYFSWKKDDSSIPSSLQITEKKEEFYSLLVFKDISARH 701
                   .:.||..|::.|.|:...:.|  .|.::...:.:......:..: .:||:: ::.||.
Human  1143 -------TVPEGDTARLLCVVAGESVNI--RWSRNGLPVQADGHRVHQSPD-GTLLIY-NLRARD 1196

  Fly   702 SGKYTCYASNAAAKVNYTAELQVRVAPRWRYEPMD 736
            .|.|||.|...:..|:.:.|::| |:|....:|.|
Human  1197 EGSYTCSAYQGSQAVSRSTEVKV-VSPAPTAQPRD 1230

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.