DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam3 and kirrel3b

DIOPT Version :9

Sequence 1:NP_996226.2 Gene:Dscam3 / 42103 FlyBaseID:FBgn0261046 Length:2087 Species:Drosophila melanogaster
Sequence 2:XP_021323594.1 Gene:kirrel3b / 572369 ZFINID:ZDB-GENE-100713-3 Length:795 Species:Danio rerio


Alignment Length:752 Identity:165/752 - (21%)
Similarity:276/752 - (36%) Gaps:164/752 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   453 GPLISLKCSASGSPPPQFAWLLDSQPI---MDVSLHHRFAIGQFVDMSGDVISHLNISHVRPDDG 514
            |..::|.||..|. .....||.|...:   .|:|.:.|:|:   |...|....||.|..|...|.
Zfish    43 GQPVTLPCSIPGY-HGVVLWLRDGLALGVGRDLSGYPRYAV---VGDHGSGEHHLRIQKVELMDD 103

  Fly   515 GLYKCVA-SNSMGSVQHSARLNVYGPPYVRAI--GPIKAV-AGEDIIVHC-PFAGYPVEQIRW-- 572
            .:::|.| ..:|.|  ..|||.|..||....|  ||:.:: ||:.:.:.| .....|...|.|  
Zfish   104 AVFECQAIQAAMRS--RPARLTVLVPPDDPMITGGPVVSLRAGDPLNLTCHADNAKPAASIIWIR 166

  Fly   573 ---------------EKAHQELTTSNHYELASVADGGQLVIKNVEPGRDQGIYTCIVRSRA---G 619
                           ....:|.|.|..|..||..:.||.:|             |...::|   |
Zfish   167 NGEVLNGAMYSKTLLRDGRRESTVSTLYISASNIESGQKII-------------CRASNKAVPNG 218

  Fly   620 EEARRDMQLNVNSPPVIEPFKFPKNLQEGGRAQITCAVSSGDMPIYFSWKKDDSSIPSSLQITEK 684
            :|.  .:.:::...|::.....|:.:.||...:..|:..:......:.|.|..|      .|.|.
Zfish   219 KET--SVTIDIQHLPLVNLSVEPQPVLEGNLVKFHCSAKANPPVTQYKWAKGGS------VIKEV 275

  Fly   685 KEEFYSLLVFKDISARHS---GKYTCYASNAAAKVNYTAELQVRVAPRWRYEPMDTAIMLGNTIS 746
            ..:.|.::|      .||   ...:|..:|.....|.:..:.|...||...||....:.||:...
Zfish   276 SGDTYEVIV------DHSFFTEPVSCEVTNPLGSTNISRNVDVYFGPRMAAEPQSLQVDLGSDAV 334

  Fly   747 INCEAEGYPIPTITWFKGQGKGSKDFKPLSMRNHSLL-LNLATDNDEGYYMCQA-TNEIGAGLKK 809
            .||...|.|..||.|.| :|.|      :.:.|.::| |......|.|.|:|:| ...:||. :|
Zfish   335 FNCAWTGNPSLTIVWMK-RGSG------VVLSNENILTLKSVRQEDAGKYVCRAVVPRVGAA-EK 391

  Fly   810 TIRINVNEPARFEQSARNISSRRNDPVTLDCHAKG-DEPITIGWTQNNGRIDL-NNFRFSIAEMK 872
            .:.:.||.|... .|.:...:...:...:.|..:. ..|..|.|:.....::. .:.|:::..:.
Zfish   392 EVSLTVNGPPTI-SSTQTHQAPHGEKGQIKCFIRSTPPPDRIAWSWKETVLESGTSGRYTVETVS 455

  Fly   873 TEKGVDSQLTIGHSDRHD-SGVYRCIAENPYGRAEQIIFLAVQERPDTPSHLEIFEVGSRTVKLS 936
            ||.||.|.||:.:....| ..:|.|.|.|.:|...:||.|  :|:..:...|.:..:....|   
Zfish   456 TEDGVLSTLTMSNIVPADFQTIYNCTAWNSFGSDTEIIRL--KEQGGSQDSLPVAVIIGVAV--- 515

  Fly   937 WRRPFDGNSPVLSYLV---QYQALKYLQSHGSLAAAGGDWNGHVINVSLPSTSI---SRSYDSDL 995
                    ...::::|   ...|....:|....:|.....:.|::..:|| |||   .|...|.:
Zfish   516 --------GAFVAFIVLMGTIGAFCCTRSQRKKSAHLCTEDAHLVMPTLP-TSICAQQRELASKI 571

  Fly   996 RESAIVAGLTPATTFLIRMQAINE------------------IERSAYTEAIVLKTQEEAPTEAP 1042
            :...: .|:..|... ||::.:::                  |||..:.:..|||..|....|..
Zfish   572 KTENL-KGVVSAKND-IRVEIVHKDHNAARESEEHSGMKQLMIERGEFQQESVLKQLEVLQEEEK 634

  Fly  1043 SNVQVQTGGESELIVTWQIPPRESWNGELIGYTVNCSEEKQNINFISVVNSSLKSTIVSGWATTK 1107
            ....:                ::..||.   |:||..:|...           ..|.::|..||:
Zfish   635 EYQHI----------------KDPTNGY---YSVNTFKEHHG-----------TPTTMAGNQTTE 669

  Fly  1108 ATLRGLRKYSRYAVT-----------IRAMNSFGSGP 1133
                 ||:....|.|           ....::.|:||
Zfish   670 -----LRRDPATATTGKQRVPTGMSFTNIYSTLGAGP 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam3NP_996226.2 IG 56..133 CDD:214652
Ig 56..125 CDD:143165
I-set 246..337 CDD:254352
Ig 264..334 CDD:143165
I-set 345..433 CDD:254352
Ig 358..431 CDD:143165
Ig 456..533 CDD:143165 22/80 (28%)
IGc2 553..619 CDD:197706 16/86 (19%)
I-set 634..724 CDD:254352 17/92 (18%)
ig 645..712 CDD:278476 13/69 (19%)
IG_like 734..815 CDD:214653 24/82 (29%)
Ig 745..815 CDD:299845 21/71 (30%)
I-set 820..913 CDD:254352 22/95 (23%)
Ig 838..920 CDD:299845 22/84 (26%)
FN3 917..1033 CDD:238020 23/139 (17%)
FN3 1040..1142 CDD:238020 18/105 (17%)
fn3 1150..1237 CDD:278470
FN3 1263..1345 CDD:238020
Ig 1350..1436 CDD:299845
IG_like 1358..1436 CDD:214653
FN3 1441..1530 CDD:238020
FN3 1542..1620 CDD:238020
kirrel3bXP_021323594.1 IG_like 35..124 CDD:214653 26/86 (30%)
Ig2_KIRREL3-like 146..227 CDD:143236 17/95 (18%)
Ig_2 235..312 CDD:316418 16/88 (18%)
I-set 316..397 CDD:333254 27/88 (31%)
Ig5_KIRREL3 399..496 CDD:143306 23/99 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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