Sequence 1: | NP_996226.2 | Gene: | Dscam3 / 42103 | FlyBaseID: | FBgn0261046 | Length: | 2087 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009291422.1 | Gene: | ush2a / 568982 | ZFINID: | ZDB-GENE-060503-794 | Length: | 5243 | Species: | Danio rerio |
Alignment Length: | 2536 | Identity: | 493/2536 - (19%) |
---|---|---|---|
Similarity: | 766/2536 - (30%) | Gaps: | 981/2536 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 EPPCLVLEKALLLGALLLAVLATPL---LATSGLRVPTFL----LEPAPRLLFGNDTGAQVTCTA 62
Fly 63 HGSPPPLVTWVLRDGSLATQVPGLRKISGNGTLHFPPFLAQYYRTDVHEATYRCR--ASNEAGTV 125
Fly 126 LSRNVQVHAVVRRQFHVHVENTEVYLGNSALIKCAIPEYVRP---------YVRVASWHRGEEIL 181
Fly 182 LPDLSDVAGR----------------YVVLAASGDLYVRSVRSED----GLMKF----------- 215
Fly 216 --SCLVTNTLNGERQRSDAVMLQVKEL------SKNL---APRTTQKPVMEIHVERGNDVHLPCN 269
Fly 270 IQGNPFPIFTWYRVSDSAALYPIPSSQRVILSRTLLLIKNAD----------ERDAGKWICQASN 324
Fly 325 QFGEQRIEIRLSVNSYVSVHILPQVQIVNSGGTANFNCTTTGSAIDAIDWLHNGKPL-----QAN 384
Fly 385 NALTTGRDNIRFLSKSSLLVQNVGRRDRGVYQCLVENQ-RASAQAMAELKLGDT----------- 437
Fly 438 -VPELIYTFIEQNVRPGPLIS----------LKCSASGSPPPQFAW-LLDSQPIMD--------- 481
Fly 482 ----VSLHHRFAIGQ-FVDMSGDVISHLNISHVRPDDGGLYKCVASNSMGSVQHSARLNVYGPPY 541
Fly 542 VRAIGPIKAVAGEDIIVHCPFAGYPVEQIRWEKAHQELTT------------------------- 581
Fly 582 --SNHYELASVADGGQLVIKN------VEPGRD----------QGIYTCIVRSRAGEEARRDMQL 628
Fly 629 ---------NVNSPPV------------------------------------IEPF-KFPKNLQ- 646
Fly 647 --EGG-------RAQITCAVSSGDMP-----------IYFSWKKDDSSIPSSLQ-ITEKKEEFYS 690
Fly 691 LLVF-------KDISAR--HSGKYT-----------------------CYASNAAAKVNYTAELQ 723
Fly 724 VRVAP------------RWRYEPMDTAIML-------------GNTISINCEAEGYPIPTITWFK 763
Fly 764 GQGKGSKDFKPLSMRNHSLLLNLATDNDEGYYMCQATNEIGAGLKKTIRIN----------VNEP 818
Fly 819 ARFEQSARNISSRRNDPV---------TLDCHAKGDEPITI--------GWTQNNGRIDLNNFRF 866
Fly 867 SIAEMKTEKGVDSQLTIGHSDRHDSGVYRCIAENPYGRAEQIIFLAVQERPDTPSHLEIFEVGSR 931
Fly 932 TVKLSWRRPFDGNSPVLSYLVQYQALKYLQSHGSLAAAGGDW-NGHVI-NVSLPSTSISRSYDSD 994
Fly 995 LRESAIVAGLTPATTFLIRMQAINEIERSAYTEAIVLKTQEEAP---------TEAPSNVQVQTG 1050
Fly 1051 GESELIVTWQIPPRESWNGELIGYTVNCSEEKQNINFISVVNSSLKSTIVSGWATTKATLRGLRK 1115
Fly 1116 YSRYAVTIRAMNSFG---SGPWSAAIFGTTAEGVPEAAPQNV---NCTALSSQSLKISWLEPPLQ 1174
Fly 1175 FHGGIIQGYKILYRPI----VHQIDFPAKLEIKRTSNLETYLHT---LHKASNYSIRVLAYTATG 1232
Fly 1233 DGLASHP---LFCQTDDDVPDAPAAIKAAALT---ADSILISWLTPKNRNGIISHYTVYSREAGR 1291
Fly 1292 KGQAKTHMVRVDENGYPVTFESRSLAENQMYEFWVSASTSVG----------------------- 1333
Fly 1334 ---EGEPTSVIAQATNTRAPARIAS--FGQVVRKAVGTGLVLECLAVGNPTPRARWLTRDRPVTF 1393
Fly 1394 SPF--YEVTNEGNLKIHRVEGSLSGNYTCTAN-NLFGSDEIQYQVIAMKP--PSA---PQIIVQY 1450
Fly 1451 ASADSIRVSWDAPDDGGAPLQGYTISYHTAGESWSITELLPENN----AFTISGLKCGNQYIIKM 1511
Fly 1512 SA------HNMVGSGVASEEINVWTKGKASQAPNANELIATNATCVNLKLSSWQNGGCSIHHFSI 1570
Fly 1571 EHRPLG-DIRWTVVTSDISNAEENRE----NLIFCDFLPAK------------WYQLRISATNDA 1618
Fly 1619 GKTTEHYHFSTTNIDGITIPPPSVFPSENDLMNNLINSTNPTSGDWFATLIVVVIITVSIITIAL 1683
Fly 1684 TIKHRRTLCGPIAEGYESRTLPGDYKEDHENRRNQQVYSASPVKT---VDKGNESEMYEISPYAT 1745
Fly 1746 FSVNGGRTGAPAKTPTRAVAAQTPLDYTMQFKTFGHPEGE------NLNATAY------PLLPSS 1798
Fly 1799 GFGHVKSKSSWHKQRYYNTEDESTLSKSMTIVAGS---QAGHS-----------KKSN------- 1842
Fly 1843 ---------------GGRSAK----SSAACSGVVAG-------------SESDTSISPSTEFSNM 1875
Fly 1876 PTYRVPCKSSRSSDGRAVVDMFRPD-----SSTESNNDQGSPAPERRHNTPRHVLGMGMAMGLGG 1935
Fly 1936 GGGGGVGGGNGPAEKRSAGQRSRKHGSAAQQPSNQTLERRKC---------PGSSNSLDSEVDAE 1991
Fly 1992 TAASLAASIAAMAG----SGAGADLSGGFRPPAGFHDGRE---------PGDHSDCEREQRALDL 2043
Fly 2044 E 2044 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam3 | NP_996226.2 | IG | 56..133 | CDD:214652 | 16/78 (21%) |
Ig | 56..125 | CDD:143165 | 13/70 (19%) | ||
I-set | 246..337 | CDD:254352 | 24/100 (24%) | ||
Ig | 264..334 | CDD:143165 | 17/79 (22%) | ||
I-set | 345..433 | CDD:254352 | 16/93 (17%) | ||
Ig | 358..431 | CDD:143165 | 15/78 (19%) | ||
Ig | 456..533 | CDD:143165 | 14/101 (14%) | ||
IGc2 | 553..619 | CDD:197706 | 21/108 (19%) | ||
I-set | 634..724 | CDD:254352 | 27/180 (15%) | ||
ig | 645..712 | CDD:278476 | 21/120 (18%) | ||
IG_like | 734..815 | CDD:214653 | 16/103 (16%) | ||
Ig | 745..815 | CDD:299845 | 12/79 (15%) | ||
I-set | 820..913 | CDD:254352 | 21/109 (19%) | ||
Ig | 838..920 | CDD:299845 | 16/89 (18%) | ||
FN3 | 917..1033 | CDD:238020 | 22/117 (19%) | ||
FN3 | 1040..1142 | CDD:238020 | 27/104 (26%) | ||
fn3 | 1150..1237 | CDD:278470 | 22/96 (23%) | ||
FN3 | 1263..1345 | CDD:238020 | 27/107 (25%) | ||
Ig | 1350..1436 | CDD:299845 | 18/90 (20%) | ||
IG_like | 1358..1436 | CDD:214653 | 16/80 (20%) | ||
FN3 | 1441..1530 | CDD:238020 | 24/101 (24%) | ||
FN3 | 1542..1620 | CDD:238020 | 18/94 (19%) | ||
ush2a | XP_009291422.1 | Laminin_G_3 | 160..297 | CDD:290121 | |
Laminin_N | 307..528 | CDD:295486 | |||
EGF_Lam | 529..577 | CDD:238012 | |||
EGF_Lam | 586..638 | CDD:238012 | |||
Laminin_EGF | 653..703 | CDD:278482 | |||
Laminin_EGF | 706..756 | CDD:278482 | |||
EGF_Lam | 759..797 | CDD:214543 | |||
Laminin_EGF | 808..857 | CDD:278482 | |||
EGF_Lam | 859..912 | CDD:238012 | |||
EGF_Lam | 913..963 | CDD:238012 | |||
EGF_Lam | 965..1014 | CDD:238012 | |||
EGF_Lam | 1015..1064 | CDD:238012 | |||
FN3 | 1177..1253 | CDD:238020 | |||
FN3 | 1264..1375 | CDD:238020 | 33/157 (21%) | ||
FN3 | 1386..1469 | CDD:214495 | 14/89 (16%) | ||
LamG | 1537..1699 | CDD:238058 | 38/216 (18%) | ||
LamG | 1737..1890 | CDD:238058 | 30/185 (16%) | ||
FN3 | 1981..2071 | CDD:238020 | 17/98 (17%) | ||
FN3 | 2163..2253 | CDD:238020 | 21/100 (21%) | ||
FN3 | 2258..2341 | CDD:238020 | 24/133 (18%) | ||
FN3 | 2352..2443 | CDD:238020 | 26/103 (25%) | ||
FN3 | 2447..2544 | CDD:238020 | 26/113 (23%) | ||
FN3 | 2547..2633 | CDD:238020 | 26/95 (27%) | ||
FN3 | 2635..2733 | CDD:238020 | 23/121 (19%) | ||
FN3 | 2743..2807 | CDD:238020 | 17/73 (23%) | ||
FN3 | 2830..2932 | CDD:238020 | 20/114 (18%) | ||
fn3 | 2939..3014 | CDD:278470 | 19/115 (17%) | ||
FN3 | 3032..>3099 | CDD:238020 | 22/73 (30%) | ||
FN3 | 3542..3611 | CDD:238020 | |||
FN3 | 3615..3701 | CDD:238020 | |||
fn3 | 3718..3784 | CDD:278470 | |||
FN3 | 3801..3887 | CDD:238020 | |||
FN3 | 3908..3971 | CDD:238020 | |||
FN3 | 3996..4086 | CDD:238020 | |||
FN3 | 4186..4284 | CDD:238020 | |||
fn3 | 4288..4366 | CDD:278470 | |||
FN3 | 4382..4465 | CDD:238020 | |||
FN3 | 4470..4553 | CDD:238020 | |||
FN3 | 4555..4653 | CDD:238020 | |||
FN3 | 4679..4753 | CDD:238020 | |||
fn3 | 4760..4830 | CDD:278470 | |||
FN3 | 4864..4955 | CDD:238020 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |