Sequence 1: | NP_996226.2 | Gene: | Dscam3 / 42103 | FlyBaseID: | FBgn0261046 | Length: | 2087 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021334866.1 | Gene: | dscama / 568643 | ZFINID: | ZDB-GENE-050310-7 | Length: | 2025 | Species: | Danio rerio |
Alignment Length: | 2161 | Identity: | 616/2161 - (28%) |
---|---|---|---|
Similarity: | 976/2161 - (45%) | Gaps: | 326/2161 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 ALLLGALLLAVLATPLLATSGLRVPTFLLEPAPRLLFGNDTGAQVTCTAHGSPPPLVTWVLRDGS 78
Fly 79 LATQVPGLRKISGNGTL---HFPPFLAQYYRTDVHEATYRCRASNEAGTVLSRNVQVHAVVRRQF 140
Fly 141 HVHVENTEVYLGNSALIKCAIPEYVRPYVRVASWHRGEEILLPDLSDVAGRYVVLAASGDLYVRS 205
Fly 206 VRSEDGLMKFSCLVTNTLNGERQRSDAVMLQVKELSKNLAPRT----TQKPVMEIHVERGNDVHL 266
Fly 267 PCNIQGNPFPIFTWYRVSDSAALYPIPSSQRVILSRTLLLIKNADERDAGKWICQASNQFGEQRI 331
Fly 332 EIRLSVNSYVSVHILPQVQIVNSGGTANFNCTTTGSAIDAIDWLHNGKPLQANNALTTGRDNIRF 396
Fly 397 --LSKSSLLVQNVGRRDRGVYQCLVENQRASAQAMAELKLGDTVPELIYTFIEQNVRPGPLISLK 459
Fly 460 CSASGSPPPQFAWLLDSQPIMDVSLHHRFAIGQFVDMSGDVISHLNISHVRPDDGGLYKCVASNS 524
Fly 525 MGSVQHSARLNVYGPPYVRAIGPIKAVAGEDIIVHCPFAGYPVEQIRWEKAHQELTTSNHYELAS 589
Fly 590 VADGGQLVIKNVEPGRDQGIYTCIVRSRAGEEARRDMQLNVNSPPVIEPFKFPKNLQEGGRAQIT 654
Fly 655 CAVSSGDMPIYFSWKKDDSSIPSSLQITEKKEEFYSLLVFKDISARHSGKYTCYASNAAAKVNYT 719
Fly 720 AELQVRVAPRWRYEPMDTAIMLGNTISINCEAEGYPIPTITWFKGQGKGSKDFKPLSMR------ 778
Fly 779 ---NHSLLLNLATDNDEGYYMCQATNEIGAGLKKTIRINVNEPARFEQSARNISSRRNDPVTLDC 840
Fly 841 HAKGDEPITIGW------TQNNGRIDLNNFRFSIAEMKTEKGVDSQLTIGHSDRHDSGVYRCIAE 899
Fly 900 NPYGRAEQIIFLAVQERPDTPSHLEIFEVGSRTVKLSWRRPFDGNSPVLSYLVQYQALKYLQSHG 964
Fly 965 SLAAAGGDWNGHVINVSLPSTSISRSYD-SDLRESAIVAGLTPATTFLIRMQAINEIERSAYTEA 1028
Fly 1029 IVLKTQEEAPTEAPSNVQVQTGGESELIVTWQIPPRESWNGELIGYTVNCSEEKQNINFISVVNS 1093
Fly 1094 SLKSTIVSGWATTKATLRGLRKYSRYAVTIRAMNSFGSGPWSAAIFGTTAEGVPEAAPQNVNCTA 1158
Fly 1159 LSSQSLKISWLEPPLQFHGGIIQGYKILYRPIVHQIDFPAKL---EIKRTSNLETY-----LHTL 1215
Fly 1216 HKASNYSIRVLAYTATGDGLASHPLFCQTDDDVPDAPAAIKAAALTADSILISWLTPKNRNGIIS 1280
Fly 1281 HYTVYSREAGRKGQAKTHMVRVDE-NGYPVTFESR--SLAENQMYEFWVSASTSVGEGEPTSVIA 1342
Fly 1343 QATNTRAPARIASFGQVVRKAVGTGLVLECLAVGNPTPRARWLTRD---RPVTFSPFYEVTNEGN 1404
Fly 1405 LKIHRVEGSLSGNYTCTANNLFGSDEIQYQVIAMKPPSAPQIIVQYASADSIRVSWDAPDDGGAP 1469
Fly 1470 LQGYTISY-HTAGESWSITELLPENNAFTISGLKCGNQYIIKMSAHNMVGSGVASEEINVWTKGK 1533
Fly 1534 ASQAPNANELIAT-NATCVNLKLSSWQNGGCSIHHFSIEHRPLGDIRWT-VVTSDISNAEENREN 1596
Fly 1597 LIFCDFLPAKWYQLRISATNDAGKTTEHYHFSTTNIDGITIPPPSVFPSENDLMNNLI-NSTNPT 1660
Fly 1661 SGDWFATLIVV--VIITVSIITIALTIKHRRTLCGPIAEGYESRTLPGDYKEDHENRRNQQV--- 1720
Fly 1721 ------------YSASPVKTVDKGNES-EMYEISPYATFSVNGGRTGAPAKTPTRAVAAQTPLDY 1772
Fly 1773 TMQFKTFGHPEGENLNATAYPLLPSSGFGHV---KSKSSWHKQRYYNTEDESTLSKSMTIVAGSQ 1834
Fly 1835 AGHSKKS----NGGRSAKSSAAC-----------------------------SGVVAGS---ESD 1863
Fly 1864 T-SISPSTEFSNMPTYRVPCKSSRSSD---GRA----------------VVDMFRPDSSTE---- 1904
Fly 1905 SNND------QGSP----------APERRHNTPRHVLGMGMAMGLGGGG---------------G 1938
Fly 1939 GGVGGGN----------GPAEKRSAGQRSRKHGSAAQQPSNQTLERRKCPGSSNSL---DSEVDA 1990
Fly 1991 ETAASLAASIAAMAGS 2006 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam3 | NP_996226.2 | IG | 56..133 | CDD:214652 | 29/79 (37%) |
Ig | 56..125 | CDD:143165 | 27/71 (38%) | ||
I-set | 246..337 | CDD:254352 | 28/94 (30%) | ||
Ig | 264..334 | CDD:143165 | 22/69 (32%) | ||
I-set | 345..433 | CDD:254352 | 25/89 (28%) | ||
Ig | 358..431 | CDD:143165 | 23/74 (31%) | ||
Ig | 456..533 | CDD:143165 | 28/76 (37%) | ||
IGc2 | 553..619 | CDD:197706 | 22/65 (34%) | ||
I-set | 634..724 | CDD:254352 | 38/89 (43%) | ||
ig | 645..712 | CDD:278476 | 26/66 (39%) | ||
IG_like | 734..815 | CDD:214653 | 29/89 (33%) | ||
Ig | 745..815 | CDD:299845 | 26/78 (33%) | ||
I-set | 820..913 | CDD:254352 | 24/98 (24%) | ||
Ig | 838..920 | CDD:299845 | 27/87 (31%) | ||
FN3 | 917..1033 | CDD:238020 | 31/116 (27%) | ||
FN3 | 1040..1142 | CDD:238020 | 29/101 (29%) | ||
fn3 | 1150..1237 | CDD:278470 | 34/94 (36%) | ||
FN3 | 1263..1345 | CDD:238020 | 27/84 (32%) | ||
Ig | 1350..1436 | CDD:299845 | 30/88 (34%) | ||
IG_like | 1358..1436 | CDD:214653 | 26/80 (33%) | ||
FN3 | 1441..1530 | CDD:238020 | 28/89 (31%) | ||
FN3 | 1542..1620 | CDD:238020 | 29/79 (37%) | ||
dscama | XP_021334866.1 | Ig | 124..217 | CDD:325142 | 28/98 (29%) |
I-set | 236..311 | CDD:254352 | 27/84 (32%) | ||
IG_like | 321..402 | CDD:214653 | 25/87 (29%) | ||
I-set | 408..502 | CDD:333254 | 35/96 (36%) | ||
IGc2 | 524..579 | CDD:197706 | 19/56 (34%) | ||
Ig | 614..679 | CDD:319273 | 27/64 (42%) | ||
Ig_DSCAM | 708..787 | CDD:143211 | 26/78 (33%) | ||
Ig | 805..898 | CDD:325142 | 27/92 (29%) | ||
FN3 | 894..988 | CDD:238020 | 31/117 (26%) | ||
FN3 | 995..1092 | CDD:238020 | 29/101 (29%) | ||
fn3 | 1100..1186 | CDD:306538 | 34/94 (36%) | ||
fn3 | 1199..1282 | CDD:306538 | 30/90 (33%) | ||
Ig | 1312..1377 | CDD:319273 | 22/64 (34%) | ||
fn3 | 1405..1471 | CDD:306538 | 20/65 (31%) | ||
FN3 | 1492..1563 | CDD:238020 | 26/76 (34%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 135 | 1.000 | Domainoid score | I4915 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG47134 | |
OrthoDB | 1 | 1.010 | - | - | D10185at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm6394 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101656 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.690 |