DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam3 and prtga

DIOPT Version :9

Sequence 1:NP_996226.2 Gene:Dscam3 / 42103 FlyBaseID:FBgn0261046 Length:2087 Species:Drosophila melanogaster
Sequence 2:NP_001038495.1 Gene:prtga / 563834 ZFINID:ZDB-GENE-061204-4 Length:1149 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam3NP_996226.2 IG 56..133 CDD:214652
Ig 56..125 CDD:143165
I-set 246..337 CDD:254352
Ig 264..334 CDD:143165
I-set 345..433 CDD:254352
Ig 358..431 CDD:143165
Ig 456..533 CDD:143165
IGc2 553..619 CDD:197706
I-set 634..724 CDD:254352
ig 645..712 CDD:278476
IG_like 734..815 CDD:214653
Ig 745..815 CDD:299845
I-set 820..913 CDD:254352
Ig 838..920 CDD:299845
FN3 917..1033 CDD:238020
FN3 1040..1142 CDD:238020
fn3 1150..1237 CDD:278470
FN3 1263..1345 CDD:238020
Ig 1350..1436 CDD:299845
IG_like 1358..1436 CDD:214653
FN3 1441..1530 CDD:238020
FN3 1542..1620 CDD:238020
prtgaNP_001038495.1 immunoglobulin domain 28..118
Ig1_Neogenin 28..118 CDD:143199
I-set 29..118 CDD:254352
immunoglobulin domain 122..211
I-set 124..210 CDD:254352
Ig 126..210 CDD:299845
immunoglobulin domain 222..309
IG_like 228..310 CDD:214653
IGc2 237..296 CDD:197706
immunoglobulin domain 314..384
IG_like 320..399 CDD:214653
Ig 332..399 CDD:299845
FN3 406..499 CDD:238020
fibronectin type III domain 406..491
fibronectin type III domain 504..590
FN3 507..597 CDD:238020
fibronectin type III domain 606..690
FN3 606..686 CDD:238020
fibronectin type III domain 710..794
FN3 713..801 CDD:238020
fibronectin type III domain 806..895
FN3 809..901 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1060..1149
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 1.000 Domainoid score I11187
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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