Sequence 1: | NP_996226.2 | Gene: | Dscam3 / 42103 | FlyBaseID: | FBgn0261046 | Length: | 2087 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_689255.3 | Gene: | robo4 / 560765 | ZFINID: | ZDB-GENE-020809-1 | Length: | 1134 | Species: | Danio rerio |
Alignment Length: | 1572 | Identity: | 289/1572 - (18%) |
---|---|---|---|
Similarity: | 475/1572 - (30%) | Gaps: | 596/1572 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 390 GRDNIRFLSKSSLLVQNVGRRDRGVYQCLVENQRASAQAMAELKLGDTVPELIYTFIEQNVRPGP 454
Fly 455 LISLKCSASGSPPPQFAWLLDSQPIMDVSLHHRFAIGQFVDMSGDVISHLNISHVRPDDGGLYKC 519
Fly 520 VASNSMGSVQHSARLNVYGPPYVRAIGPIKAVAGEDIIVHCPFAGYPVEQIRWEKAHQELTTSNH 584
Fly 585 YELASVADGGQLVIKNVEPGR----DQGIYTCIVRSRAGEEARRDMQLNVNSPPVIEPFKF-PKN 644
Fly 645 LQE--GGRAQITCAVSSGDMPIYFSWKKDDSSIPSSLQITEKKEEFYSLLVFKDISARHSGKYTC 707
Fly 708 YASN-AAAKVNYTAELQVRVAPRWRYEPMDTAIMLGNTISINCEAEGYPIPTITWFKGQG---KG 768
Fly 769 SKDFKPLSMRNHSLLLNLATDNDEGYYMCQATNEIGAGLKKTIRINVNEPARFEQSARNISSRRN 833
Fly 834 DPVTLDCHAKGDEPITIGWTQNNGRIDLNNFRFSIAEMKTEKGVDSQLTIGHSDRHDSGVYRCIA 898
Fly 899 ENPYGRAEQIIFLAVQERPDTPSHLEIFEVGSRTVKLSWRRPFDGNSPVLSYLVQYQALKYLQSH 963
Fly 964 GSLAAAGGDWNGHVINVSLPST-----SISRSYDSDLRESAIVAGLTPATTFLIRMQAINEIERS 1023
Fly 1024 AYTEAIVLKTQEEAPTEAPSNVQVQTGGE--SELIVTWQIPPRESWNGELIGYTVNCSEEKQNIN 1086
Fly 1087 FISVVNSSLKSTIVSGWATTKATLRGLRKYSRYAVTIRAMNSFGSG----PWSAAIFGTTAEGVP 1147
Fly 1148 EAAPQNVNCTALSSQSLKISWLEPPLQFHGGIIQGYKILYRPIVHQIDFPAKLEIKRTSNLETYL 1212
Fly 1213 HTLHKASNYSIRVLAYTATGDGLASHPLFCQTDDDVPDAPAAIKAAALTADSILISWLTPKNRNG 1277
Fly 1278 IISHYTVYSREAGRKGQAKTHMVRVDENGYPVTFESRSLAENQMYEFWVSASTSVG-EGEPTSVI 1341
Fly 1342 AQATNTRAPARIASFGQVVRKAVGTGLVLECLAVGNPTPRARWLTRDRPVTFSPFYEVTNEGNLK 1406
Fly 1407 IHRVEGSLSGNYTCTANNLFGSDEIQYQVIAMKPPSAPQIIVQYASADSIRVSWDAPDDGGAPLQ 1471
Fly 1472 GYTISYHTAGESWSITELLPENNAFTISGLKCGNQYIIKMSAHNMVGSGVASEEINVWTKGKASQ 1536
Fly 1537 APNANELIATNATCVNLKLSSWQ-NGGCSIHHFSIEHRPLGDIRWTVVTSDISNAEENRENLIFC 1600
Fly 1601 DFLPAKWYQLRISATNDAGKTTE-----------HYHFSTTNIDGITIPPPSVFPSE-NDLMNNL 1653
Fly 1654 INSTNPTSGDWFATLIVVVIITVSIITIALTIKHRRTLCGPIAEGYESRTLPGDYKEDHENRRNQ 1718
Fly 1719 QVYSASPVKTVDKGNESEMYEISP-YATFSVNGGRTGAPAKTPTRAVAAQTPLDYTMQFKTFGH- 1781
Fly 1782 --------PEGENLNATAYPLL-----PSSGFGHVKSKSSWHKQRYYNTEDE--------STLSK 1825
Fly 1826 SMTIVAGSQAGHSKKSNGGRSAKSSAACSGVVAGSESDTSISPSTEFSNMPTYRVPCKSSRSSDG 1890
Fly 1891 RAVVDMFRPDSS 1902 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam3 | NP_996226.2 | IG | 56..133 | CDD:214652 | |
Ig | 56..125 | CDD:143165 | |||
I-set | 246..337 | CDD:254352 | |||
Ig | 264..334 | CDD:143165 | |||
I-set | 345..433 | CDD:254352 | 9/42 (21%) | ||
Ig | 358..431 | CDD:143165 | 8/40 (20%) | ||
Ig | 456..533 | CDD:143165 | 10/76 (13%) | ||
IGc2 | 553..619 | CDD:197706 | 10/69 (14%) | ||
I-set | 634..724 | CDD:254352 | 26/93 (28%) | ||
ig | 645..712 | CDD:278476 | 21/69 (30%) | ||
IG_like | 734..815 | CDD:214653 | 26/83 (31%) | ||
Ig | 745..815 | CDD:299845 | 22/72 (31%) | ||
I-set | 820..913 | CDD:254352 | 9/92 (10%) | ||
Ig | 838..920 | CDD:299845 | 7/81 (9%) | ||
FN3 | 917..1033 | CDD:238020 | 22/120 (18%) | ||
FN3 | 1040..1142 | CDD:238020 | 30/107 (28%) | ||
fn3 | 1150..1237 | CDD:278470 | 10/86 (12%) | ||
FN3 | 1263..1345 | CDD:238020 | 12/82 (15%) | ||
Ig | 1350..1436 | CDD:299845 | 14/85 (16%) | ||
IG_like | 1358..1436 | CDD:214653 | 13/77 (17%) | ||
FN3 | 1441..1530 | CDD:238020 | 12/88 (14%) | ||
FN3 | 1542..1620 | CDD:238020 | 15/78 (19%) | ||
robo4 | XP_689255.3 | Ig1_Robo | 70..169 | CDD:143317 | 29/200 (15%) |
I-set | 71..168 | CDD:254352 | 28/194 (14%) | ||
I-set | 175..261 | CDD:254352 | 25/88 (28%) | ||
Ig2_Robo | 177..261 | CDD:143201 | 24/86 (28%) | ||
I-set | 265..350 | CDD:254352 | 28/96 (29%) | ||
Ig | 282..350 | CDD:299845 | 23/79 (29%) | ||
FN3 | 373..448 | CDD:214495 | 21/120 (18%) | ||
FN3 | 472..560 | CDD:238020 | 28/97 (29%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.900 |