DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam3 and Nptn

DIOPT Version :9

Sequence 1:NP_996226.2 Gene:Dscam3 / 42103 FlyBaseID:FBgn0261046 Length:2087 Species:Drosophila melanogaster
Sequence 2:XP_006243234.1 Gene:Nptn / 56064 RGDID:620296 Length:397 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam3NP_996226.2 IG 56..133 CDD:214652
Ig 56..125 CDD:143165
I-set 246..337 CDD:254352
Ig 264..334 CDD:143165
I-set 345..433 CDD:254352
Ig 358..431 CDD:143165
Ig 456..533 CDD:143165
IGc2 553..619 CDD:197706
I-set 634..724 CDD:254352
ig 645..712 CDD:278476
IG_like 734..815 CDD:214653
Ig 745..815 CDD:299845
I-set 820..913 CDD:254352
Ig 838..920 CDD:299845
FN3 917..1033 CDD:238020
FN3 1040..1142 CDD:238020
fn3 1150..1237 CDD:278470
FN3 1263..1345 CDD:238020
Ig 1350..1436 CDD:299845
IG_like 1358..1436 CDD:214653
FN3 1441..1530 CDD:238020
FN3 1542..1620 CDD:238020
NptnXP_006243234.1 Ig 31..146 CDD:416386
Ig strand A 32..36 CDD:409353
Ig strand A' 37..43 CDD:409353
Ig strand B 46..55 CDD:409353
Ig strand C 60..68 CDD:409353
Ig strand C' 73..77 CDD:409353
Ig strand D 87..93 CDD:409353
Ig strand E 96..105 CDD:409353
Ig strand F 112..120 CDD:409353
Ig strand G 136..146 CDD:409353
Ig 167..218 CDD:416386
Ig strand C 179..184 CDD:409353
Ig strand E 200..204 CDD:409353
Ig strand F 214..218 CDD:409353
Ig 249..332 CDD:416386
Ig strand B 252..261 CDD:409353
Ig strand C 266..272 CDD:409353
Ig strand C' 275..277 CDD:409353
Ig strand D 288..293 CDD:409353
Ig strand E 296..304 CDD:409353
Ig strand F 312..319 CDD:409353
Ig strand G 322..332 CDD:409353
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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