Sequence 1: | NP_996226.2 | Gene: | Dscam3 / 42103 | FlyBaseID: | FBgn0261046 | Length: | 2087 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005155702.1 | Gene: | igsf9a / 557459 | ZFINID: | ZDB-GENE-060503-288 | Length: | 1619 | Species: | Danio rerio |
Alignment Length: | 1879 | Identity: | 352/1879 - (18%) |
---|---|---|---|
Similarity: | 604/1879 - (32%) | Gaps: | 575/1879 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 372 IDWLHNG------KPLQANNALTTGRD-NIRFLSKSSLLVQNVGRRDRGVYQCLV------ENQR 423
Fly 424 ASAQAMAELK------LGDTVPELIYTFIEQNVRPGPLISLKCSASGSPPPQFAWLLDSQPIMDV 482
Fly 483 SLHHRFAIGQFVDMSGDVISHLNISHVRPDDGGLYKCVASNSMGSVQHSARLNVYGPPYVRAIGP 547
Fly 548 IKAV--AGEDIIVHCPFAGYPVEQIR-WEKAHQELTTSNHYELAS------VADGGQLVIKNVEP 603
Fly 604 GRDQGIYTCIVRSRAGEEARRDMQLNVNSPPVIEPFKFPK--NLQEGGRAQITCAVSSGDMPIYF 666
Fly 667 SWKKDDSSIPSSLQITEKKEEFYSLLVFKDISARHSGKYTCYASNAAAKVNYTAELQVRVAPRWR 731
Fly 732 YEPMDTAIMLGNTISINCEAEGYPIPTITWFKGQGKGSKDFKPLSMRNHSLLLNLATDNDEGYYM 796
Fly 797 CQATNEIG-AGLKKTIRINVNEPARFEQSARNISSRRNDPVT---LDCHAKGDEPITIGWTQNNG 857
Fly 858 RIDLNNFRFSIAEMKTEKGVDSQLTIGHSDRHDSGVYRCIAENPYGRAE-QIIFLAVQERPDTPS 921
Fly 922 HLEIFEVGSRTVKLSWRRPFDGNSPVLSYLVQYQALKYLQSHGSLAAAGGDWNGHVINVSLPSTS 986
Fly 987 ISRSYDSDLRESAIVAGLTPATTFLIRMQAINEIERSAYTEAIVLKTQEEAPT----EAPSNVQV 1047
Fly 1048 QTGGESELIVTW-----QIPPRESWNGELIGYTVNCSEEKQNINFISVVNSSLKSTIVSGW---- 1103
Fly 1104 -----ATTKATLRGLRKYSRYAVTIRAMN----SFGSGPWSAAIFGTTAEGVPEAAPQNVNCTAL 1159
Fly 1160 SSQSLKISWLEPPLQFHGGIIQGYKILYRPIVHQIDFPAKLEIKRTSNLETYLHTLHKA--SNYS 1222
Fly 1223 IRVLAYTATGDGLASHPL--------------FCQTD------DDVPDA-PAAIKAAALTADSIL 1266
Fly 1267 ISWLTPKN-----RNGIISHYTVYSRE--AGRKGQAKTHMVRVDENGYPVTFESRSLAENQMYEF 1324
Fly 1325 WVSASTSVGEGEPTSVIAQATNTRAPARIAS-----FGQVVRKAVGTGLVLECLAVGNPTPRARW 1384
Fly 1385 LTRDRPVTFSPFYEVTNEGNLKIHRVEGSLSGNYTCTANNLFGSDEIQYQVIAMKPPSAPQIIVQ 1449
Fly 1450 YASADSIRVSWDAPDDGGAPLQGYTISYHTAGESWSITELLPENNAFTISGLKCGNQYIIKMSAH 1514
Fly 1515 NMVGSGVASEEINVWTKGKASQAPNA------NELIATN--------ATCV----NLKLSS---- 1557
Fly 1558 ------------WQNGGCSIHHFSI--------------EHR------------PLGDIRWTVVT 1584
Fly 1585 SDISNAEENRENLIFCDFLPAKWYQLRISATNDAGKTTEHYHFSTTNIDGITIPPPSVFPSENDL 1649
Fly 1650 MNNLINSTNPTSGDWFATLIVVVIITVSIITIALTIKHRRTLCGPIAEGYESRTLPG-DYKEDHE 1713
Fly 1714 NRRNQQVYSASPVKTVD----KGNESEM------YEISPYATFSVN--GGRTGAPAKTP------ 1760
Fly 1761 TRAVAAQT--------PLD---YTMQFKTFGHPEG--ENL----NATAYPLLPSSGFGHVKSKSS 1808
Fly 1809 WHKQRYYNTEDESTLSKSMTIVAGSQAGH------SKKSNGGRSAKSSAACSGVVAGSESDTSIS 1867
Fly 1868 PSTEFSNMPTYRVPCKSSRSSD--------GRAVVDMFRPDSSTESNNDQGSPAPERRHNTPRHV 1924
Fly 1925 LGMGMAMGLGGGGGGGVGGGNGPAEKRSAGQRSRKHGSAAQQPSNQTLERRKCP-------GSSN 1982
Fly 1983 SLDSEVDAETAASLAASIAAMAGSGAGADLSGGFRPPAGFHDGREPGDHSDCEREQRAL 2041 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam3 | NP_996226.2 | IG | 56..133 | CDD:214652 | |
Ig | 56..125 | CDD:143165 | |||
I-set | 246..337 | CDD:254352 | |||
Ig | 264..334 | CDD:143165 | |||
I-set | 345..433 | CDD:254352 | 12/73 (16%) | ||
Ig | 358..431 | CDD:143165 | 12/71 (17%) | ||
Ig | 456..533 | CDD:143165 | 24/76 (32%) | ||
IGc2 | 553..619 | CDD:197706 | 16/72 (22%) | ||
I-set | 634..724 | CDD:254352 | 13/91 (14%) | ||
ig | 645..712 | CDD:278476 | 11/66 (17%) | ||
IG_like | 734..815 | CDD:214653 | 13/81 (16%) | ||
Ig | 745..815 | CDD:299845 | 9/70 (13%) | ||
I-set | 820..913 | CDD:254352 | 17/96 (18%) | ||
Ig | 838..920 | CDD:299845 | 11/82 (13%) | ||
FN3 | 917..1033 | CDD:238020 | 26/115 (23%) | ||
FN3 | 1040..1142 | CDD:238020 | 27/119 (23%) | ||
fn3 | 1150..1237 | CDD:278470 | 17/88 (19%) | ||
FN3 | 1263..1345 | CDD:238020 | 15/88 (17%) | ||
Ig | 1350..1436 | CDD:299845 | 15/90 (17%) | ||
IG_like | 1358..1436 | CDD:214653 | 11/77 (14%) | ||
FN3 | 1441..1530 | CDD:238020 | 12/88 (14%) | ||
FN3 | 1542..1620 | CDD:238020 | 22/131 (17%) | ||
igsf9a | XP_005155702.1 | IG_like | 27..110 | CDD:214653 | 10/52 (19%) |
Ig | 35..111 | CDD:299845 | 11/53 (21%) | ||
I-set | 140..221 | CDD:254352 | 29/98 (30%) | ||
IGc2 | 151..212 | CDD:197706 | 23/72 (32%) | ||
Ig | 233..318 | CDD:299845 | 18/90 (20%) | ||
I-set | 233..318 | CDD:254352 | 18/90 (20%) | ||
Ig | <349..402 | CDD:299845 | 16/143 (11%) | ||
IG_like | 423..502 | CDD:214653 | 14/90 (16%) | ||
Ig | 435..498 | CDD:143165 | 9/72 (13%) | ||
FN3 | 507..602 | CDD:238020 | 26/115 (23%) | ||
fn3 | 614..696 | CDD:278470 | 22/107 (21%) | ||
PHA02666 | 1105..>1312 | CDD:222914 | 45/269 (17%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |