DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam3 and Lrrn1

DIOPT Version :9

Sequence 1:NP_996226.2 Gene:Dscam3 / 42103 FlyBaseID:FBgn0261046 Length:2087 Species:Drosophila melanogaster
Sequence 2:NP_001032440.1 Gene:Lrrn1 / 500280 RGDID:1564145 Length:716 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam3NP_996226.2 IG 56..133 CDD:214652
Ig 56..125 CDD:143165
I-set 246..337 CDD:254352
Ig 264..334 CDD:143165
I-set 345..433 CDD:254352
Ig 358..431 CDD:143165
Ig 456..533 CDD:143165
IGc2 553..619 CDD:197706
I-set 634..724 CDD:254352
ig 645..712 CDD:278476
IG_like 734..815 CDD:214653
Ig 745..815 CDD:299845
I-set 820..913 CDD:254352
Ig 838..920 CDD:299845
FN3 917..1033 CDD:238020
FN3 1040..1142 CDD:238020
fn3 1150..1237 CDD:278470
FN3 1263..1345 CDD:238020
Ig 1350..1436 CDD:299845
IG_like 1358..1436 CDD:214653
FN3 1441..1530 CDD:238020
FN3 1542..1620 CDD:238020
Lrrn1NP_001032440.1 leucine-rich repeat 54..73 CDD:275380
LRR <68..372 CDD:227223
LRR 1 73..95
leucine-rich repeat 74..96 CDD:275380
LRR 2 96..117
leucine-rich repeat 97..120 CDD:275380
LRR 3 120..141
leucine-rich repeat 121..144 CDD:275380
LRR 4 144..165
leucine-rich repeat 145..168 CDD:275380
LRR 5 168..189
leucine-rich repeat 169..192 CDD:275380
LRR 6 192..213
leucine-rich repeat 193..216 CDD:275380
LRR 7 216..237
leucine-rich repeat 217..240 CDD:275380
LRR 8 240..261
leucine-rich repeat 241..264 CDD:275380
LRR 9 264..285
leucine-rich repeat 265..288 CDD:275380
leucine-rich repeat 289..313 CDD:275380
leucine-rich repeat 314..335 CDD:275380
leucine-rich repeat 339..362 CDD:275378
leucine-rich repeat 363..375 CDD:275378
LRRCT 371..419 CDD:214507
I-set 429..516 CDD:400151
Ig strand A' 433..438 CDD:409353
Ig strand B 441..450 CDD:409353
Ig strand C 456..460 CDD:409353
Ig strand C' 463..465 CDD:409353
Ig strand D 478..481 CDD:409353
Ig strand E 482..487 CDD:409353
Ig strand F 495..503 CDD:409353
Ig strand G 506..516 CDD:409353
FN3 531..600 CDD:214495
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 691..716
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 52 1.000 Domainoid score I11143
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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