Sequence 1: | NP_996226.2 | Gene: | Dscam3 / 42103 | FlyBaseID: | FBgn0261046 | Length: | 2087 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017449758.1 | Gene: | Nrcam / 497815 | RGDID: | 3209 | Length: | 1315 | Species: | Rattus norvegicus |
Alignment Length: | 1426 | Identity: | 309/1426 - (21%) |
---|---|---|---|
Similarity: | 526/1426 - (36%) | Gaps: | 374/1426 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 212 LMKFSCLVTNTL-----NGERQR--SDAVMLQVKELSKNLAPRTTQKPVMEIHVERGNDVHLPCN 269
Fly 270 IQGNPFPIFTWYR------VSDSAALYPIPSSQRVILSRTLLLIKNADERDAGKWICQASNQFG- 327
Fly 328 --EQRIEIRLSVNSYVSVHILPQVQIVNSGGTANFNC-TTTGSAIDAIDWLHNG-KPLQANNALT 388
Fly 389 TGRDNIRFLSKSSLLVQNVGRRDRGVY------QCLVENQRASAQAMAELKLGDTV--------- 438
Fly 439 ------PELIYTFI--------EQNVRPGPLISLKCSASGSPPPQFAWLLDSQPI-MDVSLHHRF 488
Fly 489 AIGQFVDMSGDVISHLNISHVRPDDGGLYKCVASNSMGSVQHSARLNVYGPPYVRAIGPIKAVAG 553
Fly 554 EDIIVHCPFAGYPVEQIRWEKAHQELTTSNHYELASVADGGQLVIKNVEPGRDQGIYTCIVRSRA 618
Fly 619 GEEARRDMQLNVNSPPVIEPFKFPKNLQEGGRAQITCAVSSGDMPIYFSWKKDDSSIPSSLQITE 683
Fly 684 KKEEFYSLLVFKDISARHSGKYTCYASN------AAAKVNYTAE-LQVRVAPRWRYEPMDTAIML 741
Fly 742 GNTISINCEAEGYPIPTITWFKGQGKGS---KDFKPLSMRNHSLLLNLATDNDEGYYMCQATNEI 803
Fly 804 GAGLKKTIRINVNEPARFEQSARNISSRRNDPVTLDCHAKGDEPI--TIGWTQNNGRIDLNNFRF 866
Fly 867 SIAEMKTEKGVDSQLTIGHSDRHDSGVYRCIAENPYGRAEQIIFLAV----------QERPDTPS 921
Fly 922 HLEIFEVGSRTVKLSWRRPFDGNSPVLSYLVQYQALKYLQSHGSLAAAGGDWNGHVINVSLPSTS 986
Fly 987 ISRSYDSDLRESAIVAGLTPATTFLIRMQAINEIERSAYTEA---IVLKTQEEAPTEAPSNVQVQ 1048
Fly 1049 TGGESELIVTWQIPPRESW--NGELIGYTVNCSEEKQNINFISVVNSSLKSTIVSGWATTKATLR 1111
Fly 1112 GLRKYSRYAVTIRAMNSFGSGPWSAAIFGTTAEGVPEAAPQNVNCTALSSQSLKISWLEPPLQFH 1176
Fly 1177 GGIIQGYKILYRPIVHQIDFPAKLEIKRT-------------SNLETYLHTLHKASNYSIRVLAY 1228
Fly 1229 TATGDGLASHPLFCQTDDDVPDAPAAIKAAALTADSILISWLTPKNRNGIISHYTVYSREAGRKG 1293
Fly 1294 QAKTH----MVRVDENGYPVTFESRSLAENQMYEFWVSASTSVGEGEPTSVIAQATNTRAPARIA 1354
Fly 1355 SFGQVVRKAVGTGLVLECLAVGNPTPRARWLTRDRPVTFSPFYEVTNEGNLKIHRVEGSLSGNYT 1419
Fly 1420 CTANNLFGSDEIQYQVIAMKPPSAPQIIVQYASADSIRVSWDAPDDGGAPLQGYTISYHTAG--E 1482
Fly 1483 SWSITELLPENNAFTISGLKCGNQYIIKMSAHN-----------MVGSGVASEEINVWTKG 1532 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam3 | NP_996226.2 | IG | 56..133 | CDD:214652 | |
Ig | 56..125 | CDD:143165 | |||
I-set | 246..337 | CDD:254352 | 20/99 (20%) | ||
Ig | 264..334 | CDD:143165 | 16/78 (21%) | ||
I-set | 345..433 | CDD:254352 | 19/95 (20%) | ||
Ig | 358..431 | CDD:143165 | 15/80 (19%) | ||
Ig | 456..533 | CDD:143165 | 22/77 (29%) | ||
IGc2 | 553..619 | CDD:197706 | 8/65 (12%) | ||
I-set | 634..724 | CDD:254352 | 19/96 (20%) | ||
ig | 645..712 | CDD:278476 | 11/72 (15%) | ||
IG_like | 734..815 | CDD:214653 | 25/83 (30%) | ||
Ig | 745..815 | CDD:299845 | 25/72 (35%) | ||
I-set | 820..913 | CDD:254352 | 23/94 (24%) | ||
Ig | 838..920 | CDD:299845 | 21/93 (23%) | ||
FN3 | 917..1033 | CDD:238020 | 29/118 (25%) | ||
FN3 | 1040..1142 | CDD:238020 | 26/103 (25%) | ||
fn3 | 1150..1237 | CDD:278470 | 24/99 (24%) | ||
FN3 | 1263..1345 | CDD:238020 | 20/85 (24%) | ||
Ig | 1350..1436 | CDD:299845 | 13/85 (15%) | ||
IG_like | 1358..1436 | CDD:214653 | 12/77 (16%) | ||
FN3 | 1441..1530 | CDD:238020 | 18/101 (18%) | ||
FN3 | 1542..1620 | CDD:238020 | |||
Nrcam | XP_017449758.1 | IgI_NrCAM | 50..144 | CDD:409458 | 19/96 (20%) |
Ig strand B | 68..72 | CDD:409458 | 0/3 (0%) | ||
Ig strand C | 81..85 | CDD:409458 | 1/3 (33%) | ||
Ig strand E | 106..110 | CDD:409458 | 0/3 (0%) | ||
Ig strand F | 124..129 | CDD:409458 | 1/4 (25%) | ||
Ig strand G | 138..141 | CDD:409458 | 0/2 (0%) | ||
Ig | 153..242 | CDD:416386 | 19/92 (21%) | ||
Ig strand A | 153..156 | CDD:409353 | 0/2 (0%) | ||
Ig strand A' | 158..162 | CDD:409353 | 1/4 (25%) | ||
Ig strand B | 165..173 | CDD:409353 | 1/7 (14%) | ||
Ig strand C | 180..186 | CDD:409353 | 2/5 (40%) | ||
Ig strand C' | 189..192 | CDD:409353 | 0/2 (0%) | ||
Ig strand D | 198..202 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 204..208 | CDD:409353 | 0/3 (0%) | ||
Ig strand F | 219..227 | CDD:409353 | 2/7 (29%) | ||
Ig strand G | 230..242 | CDD:409353 | 3/11 (27%) | ||
Ig | 281..362 | CDD:416386 | 24/93 (26%) | ||
Ig strand B | 292..296 | CDD:409353 | 2/3 (67%) | ||
Ig strand C | 305..309 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 327..331 | CDD:409353 | 1/3 (33%) | ||
Ig strand F | 341..346 | CDD:409353 | 2/4 (50%) | ||
Ig strand G | 354..357 | CDD:409353 | 1/2 (50%) | ||
Ig | 366..454 | CDD:416386 | 28/183 (15%) | ||
Ig strand B | 382..386 | CDD:409353 | 1/3 (33%) | ||
Ig strand C | 395..399 | CDD:409353 | 2/33 (6%) | ||
Ig strand E | 419..423 | CDD:409353 | 0/3 (0%) | ||
Ig strand F | 433..438 | CDD:409353 | 2/4 (50%) | ||
Ig strand G | 446..449 | CDD:409353 | 1/2 (50%) | ||
Ig | 460..546 | CDD:416386 | 26/93 (28%) | ||
Ig strand A | 460..463 | CDD:409353 | 0/2 (0%) | ||
Ig strand A' | 467..470 | CDD:409353 | 1/7 (14%) | ||
Ig strand B | 476..483 | CDD:409353 | 1/6 (17%) | ||
Ig strand C | 489..494 | CDD:409353 | 3/4 (75%) | ||
Ig strand C' | 496..498 | CDD:409353 | 0/2 (0%) | ||
Ig strand D | 505..509 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 512..517 | CDD:409353 | 1/4 (25%) | ||
Ig strand F | 525..533 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 536..546 | CDD:409353 | 2/10 (20%) | ||
Ig | 553..637 | CDD:416386 | 21/92 (23%) | ||
Ig strand A | 553..556 | CDD:409353 | 0/2 (0%) | ||
Ig strand A' | 558..562 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 565..574 | CDD:409353 | 2/8 (25%) | ||
Ig strand C | 582..587 | CDD:409353 | 3/4 (75%) | ||
Ig strand C' | 590..593 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 597..602 | CDD:409353 | 3/4 (75%) | ||
Ig strand E | 603..609 | CDD:409353 | 1/5 (20%) | ||
Ig strand F | 616..624 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 627..637 | CDD:409353 | 1/9 (11%) | ||
FN3 | 651..741 | CDD:238020 | 29/112 (26%) | ||
fn3 | 754..836 | CDD:394996 | 22/93 (24%) | ||
fn3 | 852..944 | CDD:394996 | 24/99 (24%) | ||
fn3 | 957..1041 | CDD:394996 | 23/88 (26%) | ||
fn3 | 1075..1143 | CDD:394996 | 20/132 (15%) | ||
Bravo_FIGEY | 1198..1287 | CDD:404722 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |