Sequence 1: | NP_996226.2 | Gene: | Dscam3 / 42103 | FlyBaseID: | FBgn0261046 | Length: | 2087 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001259868.1 | Gene: | robo2 / 44522 | FlyBaseID: | FBgn0002543 | Length: | 1519 | Species: | Drosophila melanogaster |
Alignment Length: | 1923 | Identity: | 377/1923 - (19%) |
---|---|---|---|
Similarity: | 616/1923 - (32%) | Gaps: | 646/1923 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 378 GKPLQANNALTTGRDNIRFLSKSS-----------------------LLVQNVGRRDRGVYQCLV 419
Fly 420 ----------------ENQRASAQAMAELKLGDTVPEL-IYTFIEQNVRPGPLISLKCSASGSPP 467
Fly 468 PQFAWLLDSQPIMDVSLHHRFAI---GQFVDMSGDVISHLNISHVRPD-DGGLYKCVASNSMGSV 528
Fly 529 Q-HSARLNVYGPPYVR---AIGP--IKAVAGEDIIVHC--PFAGYPVEQIRWEKAHQELTTSNHY 585
Fly 586 ELASVADGGQLVIKNVEPGRDQGIYTCIVRSRAGEEARRDMQLNVNSPPVIEPF--KFPKNLQE- 647
Fly 648 -GGRAQITCAVSSGDMPIYFSWKKDDSSIPSSLQITEKKEEFYSLLVFKDISARHSGKYTCYASN 711
Fly 712 AAAKVNYTAELQVRVAPRWRYEPMDTAIMLGNTISINCEAEGYPIPTITW-FKGQGK----GSKD 771
Fly 772 FK---PLSMRNHSLL--LNLATDNDEGYYMCQATNEIGAGLKKTIRINVN-----EPARFEQSAR 826
Fly 827 NISSRRNDPVTLDCHAKGDEPITIGWTQNNGRIDLNNF-RFSIAEMKTEKGVDSQLTIGHSDRH- 889
Fly 890 DSGVYRCIAENPYGRAE-------------QIIFLAVQE---RPDTPSHLEIFEVGSRTVKLSWR 938
Fly 939 RPFD-GNSPVLSYLVQYQALKYLQSHGSLAAAGGDWNGHVINVSLPSTSISRSYDSDLRESAIVA 1002
Fly 1003 GLTPATT--FLIRMQAINEIE-RSAYTEAIVLKTQ--------EEAPTEAPSNVQVQTGGES--- 1053
Fly 1054 --ELIVTWQIPPRESWNGELI-GYTV-----------NCSEEKQNINFI--SVVNSSLKSTIVSG 1102
Fly 1103 WATTKATLRGLRKYSRYAVTIRAMNSFGSGPWSAAIFGTTAEGVPEAAPQNVN-----CTALS-- 1160
Fly 1161 -SQSLKISWLEPPLQFHGGIIQGYKILYRPIVHQIDFPAKLEIKRTSNLETYLHTLHKASNYSIR 1224
Fly 1225 VLAYTATGDGLASHPLFCQTDDDVP-DAPAAIKAAALTADSILISWLTP--KNRNGIISHYTVYS 1286
Fly 1287 REAGRKGQAKTHMVRVDENGYPVTFESRSLAENQMYEFWVSASTSVGEG----------EP-TSV 1340
Fly 1341 IAQATNTRAPARIASFGQVVRK---AVGTGLVLECLAVGNPTPRARWLTRDRPVTFSPFYEVTNE 1402
Fly 1403 GNLKIHRVEGSLSGNYTCTANNLFGSDEIQYQVIAMKPPSAPQIIVQYASADSIRVSWDAPDDGG 1467
Fly 1468 APLQGYTISYHTAGESWSITELLPENNAFTISGLK---------CGNQYIIKMSAHNMVGSGVAS 1523
Fly 1524 EEINVWTKGKASQAPNANELIATNATCVNLKLSSWQNGGCSIH--HFSIEHRPLGDIRWTVVTSD 1586
Fly 1587 ISNAEENRENLI--FCDFLPAKWYQLRISATNDAGKTTEHY--HFSTTNIDGITIPPPSVFPSEN 1647
Fly 1648 DLMNNLINSTNPTSGDWFATLIVVVIITVSIITIALTIKHRRTLCGPIAEGYESRTLPG------ 1706
Fly 1707 ---DY-KEDHENRRNQQVYSAS---------PVKTV--DKGNESEMYEISPYATFSVNGGRTGAP 1756
Fly 1757 AKT-PTRAVAAQTPLDYTMQFKTFGHPEGENLNATAYPLLPSSGFGHVKSKSSWHKQRYYNTEDE 1820
Fly 1821 STLSKSMTIVAGSQAGHSKKSNGGRSAKSSAACSGVVAGSESDTSISP-STEFSNMPTYRVP--C 1882
Fly 1883 KSSRSSDGRAVVDMFRPDSSTESNNDQGSPAPERRHNTPRHVLGM-GMAMGLGGGGGGGVGGGNG 1946
Fly 1947 PA-------------------------------EKRSAGQRSRKHGSAAQQPSNQTLE--RRKCP 1978
Fly 1979 GSSNSLDSEVDAETA------ASLAASIAAMAGSGAGADLSGGFRPPAGFHDGRE--PGDHSDCE 2035
Fly 2036 REQRALDLEVQRVMESTGDAQLAKMDREELTSLLARYH 2073 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam3 | NP_996226.2 | IG | 56..133 | CDD:214652 | |
Ig | 56..125 | CDD:143165 | |||
I-set | 246..337 | CDD:254352 | |||
Ig | 264..334 | CDD:143165 | |||
I-set | 345..433 | CDD:254352 | 17/93 (18%) | ||
Ig | 358..431 | CDD:143165 | 16/91 (18%) | ||
Ig | 456..533 | CDD:143165 | 21/81 (26%) | ||
IGc2 | 553..619 | CDD:197706 | 22/67 (33%) | ||
I-set | 634..724 | CDD:254352 | 22/93 (24%) | ||
ig | 645..712 | CDD:278476 | 14/68 (21%) | ||
IG_like | 734..815 | CDD:214653 | 21/90 (23%) | ||
Ig | 745..815 | CDD:299845 | 19/79 (24%) | ||
I-set | 820..913 | CDD:254352 | 25/107 (23%) | ||
Ig | 838..920 | CDD:299845 | 23/99 (23%) | ||
FN3 | 917..1033 | CDD:238020 | 25/119 (21%) | ||
FN3 | 1040..1142 | CDD:238020 | 26/120 (22%) | ||
fn3 | 1150..1237 | CDD:278470 | 13/94 (14%) | ||
FN3 | 1263..1345 | CDD:238020 | 20/94 (21%) | ||
Ig | 1350..1436 | CDD:299845 | 12/88 (14%) | ||
IG_like | 1358..1436 | CDD:214653 | 11/80 (14%) | ||
FN3 | 1441..1530 | CDD:238020 | 17/97 (18%) | ||
FN3 | 1542..1620 | CDD:238020 | 9/81 (11%) | ||
robo2 | NP_001259868.1 | Ig1_Robo | 90..185 | CDD:143317 | 32/124 (26%) |
I-set | 91..184 | CDD:254352 | 30/119 (25%) | ||
I-set | 190..279 | CDD:254352 | 25/91 (27%) | ||
Ig2_Robo | 193..279 | CDD:143201 | 25/88 (28%) | ||
I-set | 283..370 | CDD:254352 | 22/89 (25%) | ||
Ig | 300..370 | CDD:299845 | 17/72 (24%) | ||
Ig | 388..>457 | CDD:299845 | 17/68 (25%) | ||
I-set | 479..561 | CDD:254352 | 23/88 (26%) | ||
Ig | 496..561 | CDD:143165 | 20/71 (28%) | ||
FN3 | 588..681 | CDD:238020 | 24/116 (21%) | ||
FN3 | <817..856 | CDD:238020 | 9/84 (11%) | ||
fn3 | 864..952 | CDD:278470 | 22/87 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45452274 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |