DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam3 and klg

DIOPT Version :9

Sequence 1:NP_996226.2 Gene:Dscam3 / 42103 FlyBaseID:FBgn0261046 Length:2087 Species:Drosophila melanogaster
Sequence 2:NP_524454.2 Gene:klg / 42707 FlyBaseID:FBgn0017590 Length:545 Species:Drosophila melanogaster


Alignment Length:501 Identity:119/501 - (23%)
Similarity:193/501 - (38%) Gaps:97/501 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   357 TANFNCTTTGSAIDAIDWLHNGKPLQANNALTTGRDNIRFLSKSSLLVQNVGRRDRGVYQCLVEN 421
            ||:.:.....|.:.......|..|||.|..:      :..:|...||..:.|.....| :..:.|
  Fly    18 TAHASANANASGLRKSSQRRNRAPLQMNCPI------LIVISLGWLLHAHAGSGGFAV-EAAISN 75

  Fly   422 QRASAQAMAELK--------LGDTVPELIYTFIEQNVRPGPLISLKCSASGSPPPQFAW-----L 473
            :.:::::|:.::        |..|:|..:..........|..:.|.|...........|     :
  Fly    76 RGSNSRSMSNVQQSAVAASTLTATLPRFLSRGHTYRAVVGDTLVLPCQVENLGNFVLLWRRGTNV 140

  Fly   474 LDSQPIMDVSLHHRFAIGQFVDMSGDVISHLNISHVRPDDGGLYKCVASNSMGSVQ-HSARLNVY 537
            |.:..|| |:...|..:     :.|   .:|.||.:.|.|.|.|.|..|:.:...| |:..:.| 
  Fly   141 LTASNIM-VTRDERVRL-----IDG---YNLEISDLEPQDAGDYVCQISDKINRDQVHTVEILV- 195

  Fly   538 GPPYVRAI---GPIKAVAGEDIIVHCPFAGYPVEQIRWEKAHQELTTSNHYELASVADGGQLVIK 599
             ||.||||   |.::|..|..|.:.|..:|.||..|.|.|     .:..:...|.:.||..|.::
  Fly   196 -PPSVRAIPTSGQLQARKGGPITLECKGSGNPVPSIYWTK-----KSGANKSTARIGDGPILTLE 254

  Fly   600 NVEPGRDQ-GIYTCIVRSRAGEEARRDMQLNVNSPPVIEPFKFPKNLQEGGRAQITCAVSSGDMP 663
            .:|  |.| |:|.|...:..|:....||:|:|..||.|:..|...:..||..|::.|.|.: |..
  Fly   255 KLE--RQQAGVYQCTADNGVGDPVTVDMRLDVLYPPDIQVEKSWIHSGEGFEAKLVCIVFA-DPV 316

  Fly   664 IYFSWKKDDSSIPSS---LQITEKKEEFYSLLVFKDISARHSGKYTCYASNAAAKVNYTAELQVR 725
            ...||.::...|.|:   :..|.....   :|..:.|.....|.|:|.|.|:..:.....||..|
  Fly   317 ATVSWYQNSFPIQSTDRRIMATRANRH---MLTIRHIQQEDFGNYSCVADNSLGRSRKYMELSGR 378

  Fly   726 ------VAPRW--------------RYEPMDTAIMLGNTISINCEAEGYPIPTITWFKGQGKGSK 770
                  .:|:|              .|.|::...:|...:.:|   |.|..|. .|        .
  Fly   379 PGAAEFYSPKWGRSPDSYNLTWKIDSYPPLEEVRLLYRRVQMN---ETYQQPG-RW--------H 431

  Fly   771 DF----------KPLSMRNHSLLLNLATDNDEGYY--MCQATNEIG 804
            ||          :||:   |.:...:...:..|||  :.||.|..|
  Fly   432 DFILTPEHRPASEPLT---HIMSYTIKNLHPGGYYEAIVQAKNRYG 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam3NP_996226.2 IG 56..133 CDD:214652
Ig 56..125 CDD:143165
I-set 246..337 CDD:254352
Ig 264..334 CDD:143165
I-set 345..433 CDD:254352 15/75 (20%)
Ig 358..431 CDD:143165 14/72 (19%)
Ig 456..533 CDD:143165 20/82 (24%)
IGc2 553..619 CDD:197706 19/66 (29%)
I-set 634..724 CDD:254352 23/92 (25%)
ig 645..712 CDD:278476 17/69 (25%)
IG_like 734..815 CDD:214653 19/83 (23%)
Ig 745..815 CDD:299845 17/72 (24%)
I-set 820..913 CDD:254352
Ig 838..920 CDD:299845
FN3 917..1033 CDD:238020
FN3 1040..1142 CDD:238020
fn3 1150..1237 CDD:278470
FN3 1263..1345 CDD:238020
Ig 1350..1436 CDD:299845
IG_like 1358..1436 CDD:214653
FN3 1441..1530 CDD:238020
FN3 1542..1620 CDD:238020
klgNP_524454.2 DUF1370 63..>124 CDD:284518 10/61 (16%)
IG_like 109..195 CDD:214653 21/94 (22%)
Ig 118..191 CDD:143165 20/81 (25%)
IG_like 205..274 CDD:214653 21/75 (28%)
IGc2 213..273 CDD:197706 19/66 (29%)
IGc2 301..367 CDD:197706 18/69 (26%)
FN3 392..486 CDD:238020 20/98 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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