Sequence 1: | NP_996226.2 | Gene: | Dscam3 / 42103 | FlyBaseID: | FBgn0261046 | Length: | 2087 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006247755.1 | Gene: | Sdk2 / 360652 | RGDID: | 1310397 | Length: | 2175 | Species: | Rattus norvegicus |
Alignment Length: | 1888 | Identity: | 416/1888 - (22%) |
---|---|---|---|
Similarity: | 666/1888 - (35%) | Gaps: | 510/1888 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 348 QVQIVNSGGTANFNCTTTGSAIDAIDWLHNGKPLQANNALTTGRDNIRFLSKSSLLVQNVGRRDR 412
Fly 413 GVYQCLVENQRASAQAMAELKLGDTVPELIY--TFIE----QNVRPGPLISLKC-SASGSPPPQF 470
Fly 471 AWLLDSQPI-----MDVSLHHRFAIGQFVDMSGDVISHLNISHVRPDDGGLYKCVASNSMGSVQH 530
Fly 531 SARL-----NVYGP-----PYVRAIGPIK---AVAG-EDIIVHCPFAGYPVEQIR--WEKAHQEL 579
Fly 580 TTSNHYELASVAD-GGQLVIKNVEPGRDQGIYTC--IVRSRAGEEARRDMQLNVNSPP--VIEPF 639
Fly 640 KFPKNLQEGGRAQITCAVSSGDMPIYFSWKKDDSSIPSSLQITEKKEEFYSLLVFKDISARHSGK 704
Fly 705 YTCYASNAAAKVNYTAELQV-RVAPRWRYEPMDTAIMLGNTISINCEAEGYPIPTITWFKGQ--- 765
Fly 766 GKGSKDFKPLS-MRNHSLLLNLATDNDEGYYMCQATN-----EIGAGLKKTIRINVNEPARFEQS 824
Fly 825 ARNISSRRNDPVTLDCHAKGDEPITIGW----------TQNNGRIDLNNFRFSIAEMKTEKGVDS 879
Fly 880 QLTIGHSDRHDSGVYRCIAENPYGRAEQIIFLAVQERPDTPSH----LEIFEVGSRTVKLSWRRP 940
Fly 941 FDGNSPVLSYLVQYQALKYLQSHGSLAAAGGDWNGHVINVSLPSTSISRSYDSDLRESAIVAGLT 1005
Fly 1006 PATTFLIRMQAINEIERSAY---TEAIVLKTQEEAPTEAPSNVQVQTGGESELIVTWQIPPRESW 1067
Fly 1068 NGELIGYTVN-C------SEEKQNINFISVVNSSLKSTIVSGWATTKATLRGLRKYSRYAVTIRA 1125
Fly 1126 MNSFGSGPWSAAIFGTTAEGVPEAAPQNVNCTALSSQSLKISWLEPPLQFHGGIIQGYKIL-YRP 1189
Fly 1190 IVHQIDFPAKLEIKRTS---NLETYLHT-----LHKASNYSIRVLAYTATGDGLASHPLFCQTDD 1246
Fly 1247 DVPDAPAAIKAAALTADSILISWLTPKNRNGIISHYTVYSREAGRKGQAKTHMVRVDENGYP-VT 1310
Fly 1311 FESR--SLAENQMYEFWVSASTS------------------------------------------ 1331
Fly 1332 -------------------VGEGEPTSVIAQATN------------------------------- 1346
Fly 1347 -----------TRAPARIASFGQVVRKAVGTGLVLECLAV------GNP---------------- 1378
Fly 1379 -----TPRAR------------WL------------------------TRDRPVTFSP------- 1395
Fly 1396 ----------------------------FYEVTNEGNLKIHRVEGSLSGNYTCTANNLFGSDEIQ 1432
Fly 1433 ---YQVIAMKPPSAPQIIVQ---------------YASADSIRVSWDAPDDGGAPLQGYTISYH- 1478
Fly 1479 --TAGESWSITELLPENNAFTISGLKCGNQYIIKMSAHNMVGSGVASEEINVWTKGKASQAPNAN 1541
Fly 1542 ELIATNATCVNLKLSSWQNG--GCS-IHHFSIEHRPLGDIRWTVVTSDISNAEENRENLIFCDFL 1603
Fly 1604 PAKWYQLRISATNDAGKT--TEHYHFSTTNIDGITIPPPSVFPSENDLMNNLINSTNPTSGDWFA 1666
Fly 1667 TLIVVVIITVSIITIALTIKHRRTLCGPIAEGYESRTLPGDYKEDHENRRNQQVYS----ASPVK 1727
Fly 1728 T---VDKGNESEMYEISPYATFSVNGGRTGAPAK------TPTRA-------VAAQTPLDYTMQF 1776
Fly 1777 KTFGHPEGENLNATAYPLLPSSGFGHVKSKSSWHKQRYYNTEDESTL--------SKSMT----- 1828
Fly 1829 ---IVAGSQAGHSKKS--NGGRSAKSSAACSGVVAGSE-SDTSISPS---TEFSNMPT--YRV-- 1880
Fly 1881 -PC 1882 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam3 | NP_996226.2 | IG | 56..133 | CDD:214652 | |
Ig | 56..125 | CDD:143165 | |||
I-set | 246..337 | CDD:254352 | |||
Ig | 264..334 | CDD:143165 | |||
I-set | 345..433 | CDD:254352 | 21/84 (25%) | ||
Ig | 358..431 | CDD:143165 | 19/72 (26%) | ||
Ig | 456..533 | CDD:143165 | 18/82 (22%) | ||
IGc2 | 553..619 | CDD:197706 | 16/71 (23%) | ||
I-set | 634..724 | CDD:254352 | 22/91 (24%) | ||
ig | 645..712 | CDD:278476 | 14/66 (21%) | ||
IG_like | 734..815 | CDD:214653 | 29/89 (33%) | ||
Ig | 745..815 | CDD:299845 | 26/78 (33%) | ||
I-set | 820..913 | CDD:254352 | 17/102 (17%) | ||
Ig | 838..920 | CDD:299845 | 17/91 (19%) | ||
FN3 | 917..1033 | CDD:238020 | 31/122 (25%) | ||
FN3 | 1040..1142 | CDD:238020 | 26/108 (24%) | ||
fn3 | 1150..1237 | CDD:278470 | 28/95 (29%) | ||
FN3 | 1263..1345 | CDD:238020 | 29/145 (20%) | ||
Ig | 1350..1436 | CDD:299845 | 24/186 (13%) | ||
IG_like | 1358..1436 | CDD:214653 | 22/178 (12%) | ||
FN3 | 1441..1530 | CDD:238020 | 23/106 (22%) | ||
FN3 | 1542..1620 | CDD:238020 | 20/80 (25%) | ||
Sdk2 | XP_006247755.1 | IG_like | 43..112 | CDD:214653 | 22/86 (26%) |
IGc2 | 43..101 | CDD:197706 | 19/75 (25%) | ||
IG_like | 123..206 | CDD:214653 | 21/97 (22%) | ||
Ig | 135..191 | CDD:299845 | 16/70 (23%) | ||
IG_like | 225..307 | CDD:214653 | 21/89 (24%) | ||
IGc2 | 236..289 | CDD:197706 | 13/60 (22%) | ||
I-set | 311..400 | CDD:254352 | 22/91 (24%) | ||
Ig | 329..397 | CDD:143165 | 16/69 (23%) | ||
I-set | 405..495 | CDD:254352 | 29/89 (33%) | ||
Ig | 419..495 | CDD:299845 | 26/75 (35%) | ||
Ig | 505..589 | CDD:299845 | 17/103 (17%) | ||
IG_like | 505..589 | CDD:214653 | 17/103 (17%) | ||
FN3 | 593..684 | CDD:238020 | 28/116 (24%) | ||
FN3 | 696..789 | CDD:238020 | 26/107 (24%) | ||
FN3 | 797..893 | CDD:238020 | 30/102 (29%) | ||
FN3 | 898..986 | CDD:238020 | 24/94 (26%) | ||
FN3 | 996..1090 | CDD:238020 | 7/93 (8%) | ||
FN3 | 1102..1197 | CDD:238020 | 12/94 (13%) | ||
FN3 | 1204..1293 | CDD:238020 | 12/88 (14%) | ||
FN3 | 1304..1397 | CDD:238020 | 19/92 (21%) | ||
FN3 | 1403..1487 | CDD:238020 | 21/86 (24%) | ||
FN3 | 1506..1619 | CDD:238020 | 24/127 (19%) | ||
FN3 | 1629..1722 | CDD:238020 | 22/107 (21%) | ||
FN3 | 1727..1808 | CDD:238020 | 14/41 (34%) | ||
FN3 | 1840..1919 | CDD:238020 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |