Sequence 1: | NP_996226.2 | Gene: | Dscam3 / 42103 | FlyBaseID: | FBgn0261046 | Length: | 2087 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005166847.1 | Gene: | itgb4 / 335269 | ZFINID: | ZDB-GENE-030131-7209 | Length: | 1931 | Species: | Danio rerio |
Alignment Length: | 1350 | Identity: | 258/1350 - (19%) |
---|---|---|---|
Similarity: | 433/1350 - (32%) | Gaps: | 454/1350 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 516 LYKCVASNSMGSVQHSARL-------NVY-GPPYVRAIGPIKAVAGEDIIVHCPFAGYPVEQIRW 572
Fly 573 EKAHQELTTSNHYELASVADGGQLVIKNVEPGRDQGI-YTCIVR-------------SRAGEEAR 623
Fly 624 RDMQLNVNSP----PVIEP-----FKFPKNLQEGGRAQITCAVSSGDMPIYFSWKKDDSSIPSSL 679
Fly 680 QITEKKEEFYSLLVFKDISARHSGKYTCYA-SNAAAKVNYTAELQVRVAPRWRYEPMDTAIMLGN 743
Fly 744 TISINCEAEGYPIPTITWFKGQGKGSKDFKPLSMRNHSLLLNLATDNDEGYYMCQATNEIGAGLK 808
Fly 809 KTIRINVNEPARFEQSARNIS--------SRR----NDPVTLDCHAKGDEPITIGWTQNNGRIDL 861
Fly 862 NNF-----RFSIAEMKTEKGVDSQ-LTIGHSD--RHDSGVYRCIAE--NP-----YGRAEQIIFL 911
Fly 912 AVQERPDTPSHLEIFEVGSRT---------------------VKLSWR----RPFDGNSPVLSYL 951
Fly 952 VQYQALKYLQSHGSLAAAGGDWNGHVINV-SLPSTSISRSYDSDLRESAIVAGLTPATTFLIRMQ 1015
Fly 1016 AINEIERSAYTEAIVL------KTQEEAPTE--------------APSNVQVQTGGESELIVTWQ 1060
Fly 1061 IPPRESWNGELIGYTVNCSEEKQNINFISVVNSSLKSTIVSGWATTKATLRGLRKYSRYAVTIRA 1125
Fly 1126 MNSFGSGPWSAAIFGTTAEGVPEAAPQNVNCTALSSQSLKISWLEPPLQFHGGIIQGYKILYRPI 1190
Fly 1191 VHQ---IDFPAKLEIKRTSNLETYLHTLHKASNYSIRVLAYTATGDG--------LASHPLFCQT 1244
Fly 1245 DDDVPDAPAAIKAAALTADSILI--------------------------------SWLTPKNRNG 1277
Fly 1278 -----IISHYTVYSREAGR---------------KGQAKTHMVRVDENGY---PVTFESRSLAEN 1319
Fly 1320 QMYEFWVSASTSVGEGEPTSVIAQATNTRAPARIASFGQVVRKAVGTGLVLECLAVGNPTPRARW 1384
Fly 1385 LTRDRPVTFSPFYEVTNEGNLKIHRVEGSLSGNYTCTANNLFGSDEIQYQVIAMK---------- 1439
Fly 1440 --PPSAPQIIVQYASADSIRVSWDAPDDGGAPLQGYTISYH--TAGESWSITELLPENNAFTISG 1500
Fly 1501 LKCGNQYIIKMSAHNMVG-----SGVASEEINVWTKGKASQAPNA----------NELIATNATC 1550
Fly 1551 VNLKLSSWQNGGCSIHHFSIEHRPLGDIRWTVVT-------SDISNAEEN---RENLIFCDFLPA 1605
Fly 1606 KWYQLRISA-----------------TNDAGKTTEHYHFSTTNIDGITIP 1638 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam3 | NP_996226.2 | IG | 56..133 | CDD:214652 | |
Ig | 56..125 | CDD:143165 | |||
I-set | 246..337 | CDD:254352 | |||
Ig | 264..334 | CDD:143165 | |||
I-set | 345..433 | CDD:254352 | |||
Ig | 358..431 | CDD:143165 | |||
Ig | 456..533 | CDD:143165 | 4/16 (25%) | ||
IGc2 | 553..619 | CDD:197706 | 10/79 (13%) | ||
I-set | 634..724 | CDD:254352 | 21/95 (22%) | ||
ig | 645..712 | CDD:278476 | 14/67 (21%) | ||
IG_like | 734..815 | CDD:214653 | 8/80 (10%) | ||
Ig | 745..815 | CDD:299845 | 7/69 (10%) | ||
I-set | 820..913 | CDD:254352 | 23/119 (19%) | ||
Ig | 838..920 | CDD:299845 | 18/96 (19%) | ||
FN3 | 917..1033 | CDD:238020 | 27/147 (18%) | ||
FN3 | 1040..1142 | CDD:238020 | 22/115 (19%) | ||
fn3 | 1150..1237 | CDD:278470 | 24/97 (25%) | ||
FN3 | 1263..1345 | CDD:238020 | 27/136 (20%) | ||
Ig | 1350..1436 | CDD:299845 | 12/85 (14%) | ||
IG_like | 1358..1436 | CDD:214653 | 11/77 (14%) | ||
FN3 | 1441..1530 | CDD:238020 | 23/95 (24%) | ||
FN3 | 1542..1620 | CDD:238020 | 21/104 (20%) | ||
itgb4 | XP_005166847.1 | Integrin_beta | 37..457 | CDD:278776 | |
EGF_2 | <468..490 | CDD:285248 | |||
EGF_2 | 545..573 | CDD:285248 | |||
Integrin_B_tail | 625..709 | CDD:285239 | |||
Calx-beta | 991..1064 | CDD:295344 | 12/73 (16%) | ||
FN3 | 1242..1326 | CDD:238020 | 21/99 (21%) | ||
FN3 | 1331..1420 | CDD:238020 | 24/91 (26%) | ||
fn3 | 1640..1720 | CDD:278470 | 18/80 (23%) | ||
fn3 | 1751..1835 | CDD:278470 | 20/94 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |