Sequence 1: | NP_996226.2 | Gene: | Dscam3 / 42103 | FlyBaseID: | FBgn0261046 | Length: | 2087 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_608592.2 | Gene: | robo3 / 33314 | FlyBaseID: | FBgn0041097 | Length: | 1342 | Species: | Drosophila melanogaster |
Alignment Length: | 1748 | Identity: | 339/1748 - (19%) |
---|---|---|---|
Similarity: | 549/1748 - (31%) | Gaps: | 555/1748 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 246 PRTTQKPVMEIHVERGNDVHLPCNIQGNPFPIFTWYRVSDSAALYPIPSSQRVILSR----TLLL 306
Fly 307 IKNADERDAGKWICQASNQFGEQRIEIRLSVNSYVSVHIL-------PQVQIVNSGGTANFNCTT 364
Fly 365 -TGSAIDAIDWLHNGKPLQANNALTTGRDNIRFLSKSSLLVQNVGRRDRGVYQCLVENQ---RAS 425
Fly 426 AQAMAELKLGDTVPELIYTFIEQNVRPGPLISLKCSASGSPPPQFAWLLDSQPIMDVSLHHRFAI 490
Fly 491 GQFVDMSGDVIS-----HLNISHVRPDDGGLYKCVASNSMGSVQHSARLNVYGPP-YVRAIGPIK 549
Fly 550 AVAGEDIIVHCPFAGYPVEQIRWEKAHQELTTSNHYELASVADGGQLVIKNVEPGRDQGIYTCIV 614
Fly 615 RSRAGEEARRDMQLNVNSPPVIEPFKFPKNLQEGGRAQITCAVSSGDMPIYFSWKKDDSSIPSSL 679
Fly 680 QITEKKEEFYSLLVFKDISARHSGKYTCYASNAAAKVNYTAELQV-----RVAPRWRYEPMDTAI 739
Fly 740 MLGNTISINCEAEGYPIPTITWFKGQGKGSKDFKPLSMRNHS-----LLLNLATDNDEGYYMCQA 799
Fly 800 TNEIGAGLKKT------IRINVNEPARFEQSARNIS--SRRNDPVTLDCHAKGDEPITIGWTQNN 856
Fly 857 GRIDLNNFRFSIAEMKTEKGVDSQLTIGHSDRHDSGVYRCIAENPYGRAEQIIFLAVQERPDTPS 921
Fly 922 HLEIFEVGSRTVKLSWRRPFDGNSPVLSYLVQYQALKYL---QSHGSLAAAGGDWNGHVINVSLP 983
Fly 984 STSISRSYDSDLRESAIVAGLTPATTFLIRMQAINEIERSAYTEAIVLKTQEEAPTEAPSNVQVQ 1048
Fly 1049 TGGESELIVTWQIPPRESW---NGELI-GYTVNCSE-EKQNINFISVVNSSLKSTIVSGWATTKA 1108
Fly 1109 TLRGLRKYSRYAVTIRAMNSFGSGPWSAAIFG--------TTAEGVPEAAPQNVNCTALSSQSLK 1165
Fly 1166 ISWLEP-PLQFHGGIIQGYKILYRPIVHQIDFPAKLEIKRTSNLETYLHTLHKAS-----NYSIR 1224
Fly 1225 VLAYTATGDGLASHPLFCQTDDDVPDAPAAIKAAALTADSILISWLTPKNRNGIISHYTVYSREA 1289
Fly 1290 GRKGQAKTHMVRVDENGYPVTFESRSLAENQMYEFWVSA-------------------------- 1328
Fly 1329 STSVGEGEPTSVIAQATNTRAPARIASFGQVVRKAVGTGLVLECLAVGNPTPRARWLTRDRPVTF 1393
Fly 1394 SPFYEVTNEGNLKIHRVEGSLSGNYTCTANNLFGSDEIQYQVIAMKPPSAPQIIVQYASADSIRV 1458
Fly 1459 ---------SWDAPDDGGAPLQGYTISYHTAGESWSITELLPENNAFTISGLKCGNQYIIKMSAH 1514
Fly 1515 NMVGSGVASEEINVWTKGKASQAPNANELIATNATCVNLKLSSWQNGGC-----SIHHFSIEHRP 1574
Fly 1575 LGDIRWTVVTSDISNAEENRENLIFCDFLPAKWYQLRISATNDAGKTTEHYHFSTTNIDGITIPP 1639
Fly 1640 PSVFP---SEN--DLMNNLINSTNPTSGDWFATLIVVVIITVSIITIALTIKHRRTLCGPIAEGY 1699
Fly 1700 ESRTLPGDYKEDHENRRNQQVYSASPVKTVDKGNESEMYEISPYATFSVNGGRTGAPAKTPTRAV 1764
Fly 1765 AAQTPLDYTMQFKTFGHP-EGENL------NATAYPL--------LPSSGFGHVKSKSSWHKQRY 1814
Fly 1815 YNTED---ESTLSKSMTIVAGSQAGHSKKSNGGRSAKSSAACSGVVAGSESDTSISPS 1869 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam3 | NP_996226.2 | IG | 56..133 | CDD:214652 | |
Ig | 56..125 | CDD:143165 | |||
I-set | 246..337 | CDD:254352 | 28/94 (30%) | ||
Ig | 264..334 | CDD:143165 | 23/73 (32%) | ||
I-set | 345..433 | CDD:254352 | 24/98 (24%) | ||
Ig | 358..431 | CDD:143165 | 18/76 (24%) | ||
Ig | 456..533 | CDD:143165 | 21/81 (26%) | ||
IGc2 | 553..619 | CDD:197706 | 12/65 (18%) | ||
I-set | 634..724 | CDD:254352 | 14/89 (16%) | ||
ig | 645..712 | CDD:278476 | 8/66 (12%) | ||
IG_like | 734..815 | CDD:214653 | 22/91 (24%) | ||
Ig | 745..815 | CDD:299845 | 21/80 (26%) | ||
I-set | 820..913 | CDD:254352 | 11/94 (12%) | ||
Ig | 838..920 | CDD:299845 | 9/81 (11%) | ||
FN3 | 917..1033 | CDD:238020 | 19/118 (16%) | ||
FN3 | 1040..1142 | CDD:238020 | 22/114 (19%) | ||
fn3 | 1150..1237 | CDD:278470 | 22/92 (24%) | ||
FN3 | 1263..1345 | CDD:238020 | 12/107 (11%) | ||
Ig | 1350..1436 | CDD:299845 | 16/85 (19%) | ||
IG_like | 1358..1436 | CDD:214653 | 14/77 (18%) | ||
FN3 | 1441..1530 | CDD:238020 | 14/97 (14%) | ||
FN3 | 1542..1620 | CDD:238020 | 8/82 (10%) | ||
robo3 | NP_608592.2 | Ig | 22..117 | CDD:299845 | 30/101 (30%) |
I-set | 23..116 | CDD:254352 | 30/100 (30%) | ||
I-set | 122..211 | CDD:254352 | 24/95 (25%) | ||
Ig | 125..211 | CDD:299845 | 24/92 (26%) | ||
I-set | 215..302 | CDD:254352 | 27/101 (27%) | ||
Ig | 232..302 | CDD:299845 | 22/84 (26%) | ||
I-set | 306..401 | CDD:254352 | 27/182 (15%) | ||
Ig | 320..411 | CDD:299845 | 28/178 (16%) | ||
I-set | 412..492 | CDD:254352 | 21/86 (24%) | ||
IGc2 | 429..489 | CDD:197706 | 17/63 (27%) | ||
FN3 | 519..612 | CDD:238020 | 24/174 (14%) | ||
FN3 | 644..735 | CDD:238020 | 21/111 (19%) | ||
fn3 | 743..832 | CDD:278470 | 22/92 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45452275 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |