DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam3 and AgaP_AGAP010242

DIOPT Version :9

Sequence 1:NP_996226.2 Gene:Dscam3 / 42103 FlyBaseID:FBgn0261046 Length:2087 Species:Drosophila melanogaster
Sequence 2:XP_554155.3 Gene:AgaP_AGAP010242 / 3292147 VectorBaseID:AGAP010242 Length:919 Species:Anopheles gambiae


Alignment Length:904 Identity:204/904 - (22%)
Similarity:335/904 - (37%) Gaps:193/904 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   439 PELIYTFIEQNVRPGPLISLKCSASGSPPPQFAWLLDSQPIMDVSLHHRFAIGQFVDMSGDVISH 503
            |.:|...|:..|......:|.|.|.|.|.|...|..|..|:..:...||.|:     .:|.:...
Mosquito    19 PRIIEHPIDTTVPRHEPATLNCKAEGIPQPTIQWYKDGAPLKILQGSHRIAL-----PAGGLFFL 78

  Fly   504 LNISHVRPDDGGLYKCVASNSMGSVQ-HSARLNV--------YGPPYVRAIGPIKAVAGEDIIVH 559
            ..::..|..|.|:|.|.|.|..|..: .:|.|.|        ..|.:.|      ...||.:::.
Mosquito    79 KVVNSRRESDAGVYWCEARNENGIARSRNATLQVAVLREEFRLEPQHTR------VAQGETVLLE 137

  Fly   560 C-PFAGYPVEQIRWEKAHQELTTSNHYELASVADGGQLVIKNVEPGRDQGIYTCIVRSRAGEEAR 623
            | |..|.|...:.|.|..|:|.......: .:.|||.|.|::|.. .|:|.|.||.::..|....
Mosquito   138 CGPPKGIPEPTLWWRKNGQKLEVEASKRI-RIVDGGNLAIQDVRQ-TDEGQYQCIAKNLVGVRES 200

  Fly   624 RDMQLNVNSPPVIEPFKFPKNLQEGGRAQITCAVSSGDMPIYFSWKKDDS--SIP-SSLQITEKK 685
            ....|.|:..|.:......:.:.||......|.|....||... |::..|  ::| :.:.|.|.:
Mosquito   201 ATAFLKVHVKPFLIRGPHDQTVVEGTSVTFQCRVGGDPMPDVL-WRRSASGGNMPLNRVHILEDR 264

  Fly   686 EEFYSLLVFKDISARHSGKYTCYASNAAAKVNYTAELQVRVAPRWRYEPMDTAIMLGNTISINCE 750
            .     |..:|:.....|:|:|.|.||...::.|..|.|...|.....|:...:...:.:|..|:
Mosquito   265 S-----LRLEDVVLDDEGEYSCEADNAVGAISATGTLTVHSPPHLSIRPVPQVVEAPHDVSFECK 324

  Fly   751 AEGYPIPTITWFKGQGKGSKDFKPLSMRNHS----------LLLNLATDNDEG-YYMCQATNEIG 804
            :||.|.||..| ..:|..:..|...|:....          |.|...|.:|.| ..:|.|.|.:|
Mosquito   325 SEGRPKPTTFW-SIEGNRTLIFPGTSIDRFETTYTQESLTVLTLTQTTKSDNGLVIVCSAVNSVG 388

  Fly   805 AGLKKTIRINV-----NEPARFEQSARNISSRRNDPVTLDCHAKGDEPITIGWTQNNGRIDLNNF 864
            : :....|:.|     ..|........|.:......|::.|:|.|:....|.|..:...: :.:.
Mosquito   389 S-VSVRARLMVASQDDRPPPIIILGPTNQTLPSKSTVSMACNAVGNPNPFISWYLDGNPV-VPSE 451

  Fly   865 RFSIAEMKT------EKGVDSQLTIGHSDRHDSGVYRCIAENPYGRAEQIIFLAVQ--------- 914
            |.:|.|..|      |||.            |.|:|.|:|.:..|::....||.|:         
Mosquito   452 RINITENGTLLLRELEKGT------------DQGLYTCVASSRSGKSTWSAFLRVESPTNPNVNF 504

  Fly   915 -------ERPDTPSHLEIFEVGSRTVKLSWRRPF-DGNSPVLSYLVQ------------------ 953
                   |.|..|...:|..:.:.::.:||.... .|.|.:..||::                  
Mosquito   505 YRAPEPSEFPSAPGKPQIVNISNSSITISWLPSIKSGASDINGYLIEVFSSDMAKGWTTVPFKVS 569

  Fly   954 -----YQALKYLQSHGSLAAAGGDWNGHVINVSLPSTSISRSYD--SDLRESAIVAGLTPATTFL 1011
                 |..:....|:..:..|..|....:.::.....||.|.::  .|:       .|:.|...|
Mosquito   570 STSYSYSPISPNVSYIFIVRAENDQGLGIPSLMSDPVSIGREFNHGEDI-------NLSEAQATL 627

  Fly  1012 IRMQAINEIERSAYTEAIVLKTQEEAPTEAPSNVQVQTGGESELIVTWQIPPRESWNGELI-GYT 1075
            ...|.:|.:|.:|              |:|.|           :.:.|:|.     ||:.: |:.
Mosquito   628 SSGQVVNLLEANA--------------TDATS-----------VRLAWEIV-----NGQYVEGFY 662

  Fly  1076 VNCSEEKQNINFISVVNSSLKSTIVSGWATTKATLRGLRKYSRYAVTIRAMNSFGSGPWSAAIFG 1140
            :...:...|..:.::       |::.|...:..|:.||.|::.|        .|...|:...|.|
Mosquito   663 IYSRKVNSNGTYRTL-------TVLHGGGASACTINGLEKFTEY--------EFFLVPFYKTIQG 712

  Fly  1141 --------TTAEGVPEAAPQNVNCTALSSQSLKISWLEPP--------LQFHGGIIQGYKILYRP 1189
                    .|.|.||.|:|.|:....|::.::.:.| |||        |:.:..||:||.     
Mosquito   713 RPSNSRSTCTLEDVPTASPVNLEAVLLNTSAVYLKW-EPPSNSTINGKLKHYHIIIRGYD----- 771

  Fly  1190 IVHQIDFPAKLEIKRTSNLET---YLHTLHKASNYSIRVLAYTATGDGLASHPLFCQTD 1245
             ||.|   :|:....|.:.|.   .|..|.....||:.:.|.|..|.|..|.|...:.|
Mosquito   772 -VHNI---SKVLTNMTVDGEAPKLLLANLSAGVTYSVSIAASTKVGIGPYSIPSILRLD 826

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam3NP_996226.2 IG 56..133 CDD:214652
Ig 56..125 CDD:143165
I-set 246..337 CDD:254352
Ig 264..334 CDD:143165
I-set 345..433 CDD:254352
Ig 358..431 CDD:143165
Ig 456..533 CDD:143165 21/77 (27%)
IGc2 553..619 CDD:197706 21/66 (32%)
I-set 634..724 CDD:254352 22/92 (24%)
ig 645..712 CDD:278476 17/69 (25%)
IG_like 734..815 CDD:214653 22/91 (24%)
Ig 745..815 CDD:299845 21/80 (26%)
I-set 820..913 CDD:254352 22/98 (22%)
Ig 838..920 CDD:299845 23/103 (22%)
FN3 917..1033 CDD:238020 24/141 (17%)
FN3 1040..1142 CDD:238020 19/110 (17%)
fn3 1150..1237 CDD:278470 26/97 (27%)
FN3 1263..1345 CDD:238020
Ig 1350..1436 CDD:299845
IG_like 1358..1436 CDD:214653
FN3 1441..1530 CDD:238020
FN3 1542..1620 CDD:238020
AgaP_AGAP010242XP_554155.3 Ig 18..113 CDD:299845 27/98 (28%)
I-set 19..112 CDD:254352 27/97 (28%)
I-set 118..207 CDD:254352 25/96 (26%)
Ig 121..207 CDD:299845 25/93 (27%)
I-set 211..298 CDD:254352 22/92 (24%)
Ig 228..298 CDD:299845 19/75 (25%)
I-set 302..398 CDD:254352 23/97 (24%)
Ig 319..406 CDD:299845 22/88 (25%)
I-set 407..494 CDD:254352 22/99 (22%)
IGc2 422..484 CDD:197706 18/74 (24%)
FN3 514..600 CDD:238020 13/85 (15%)
FN3 636..722 CDD:238020 22/130 (17%)
FN3 731..824 CDD:238020 28/102 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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