Sequence 1: | NP_996226.2 | Gene: | Dscam3 / 42103 | FlyBaseID: | FBgn0261046 | Length: | 2087 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006516011.1 | Gene: | Nrcam / 319504 | MGIID: | 104750 | Length: | 1308 | Species: | Mus musculus |
Alignment Length: | 1418 | Identity: | 313/1418 - (22%) |
---|---|---|---|
Similarity: | 527/1418 - (37%) | Gaps: | 365/1418 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 212 LMKFSCLVTNTLNGERQRSDAVMLQVKELSKNLAPRT-TQKPVMEIHVERGNDVHLPCNIQGNPF 275
Fly 276 PIFTWYR------VSDSAALYPIPSSQRVILSRTLLLIKNADERDAGKWICQASNQFG---EQRI 331
Fly 332 EIRLSVNSYVSVHILPQVQIVNSGGTANFNC-TTTGSAIDAIDWLHNG-KPLQANNALTTGRDNI 394
Fly 395 RFLSKSSLLVQNVGRRDRGVY------QCLVENQRASAQAMAELKLGDTV--------------- 438
Fly 439 PELIYTFI--------EQNVRPGPLISLKCSASGSPPPQFAWLL-DSQPIMDVSLHHRFAIGQFV 494
Fly 495 DMSGDVISHLNISHVRPDDGGLYKCVASNSMGSVQHSARLNVYGPPYVRAIGPIKAVAGEDIIVH 559
Fly 560 CPFAGYPVEQIRWEKAHQELTTSNHYELASVADGGQLVIKNVEPGRDQGIYTCIVRSRAGEEARR 624
Fly 625 DMQLNVNSPPVIEPFKFPKNLQEGGRAQITCAVSSGDMPIYFSWKKDDSSIPSSLQITEKKEEFY 689
Fly 690 SLLVFKDISARHSGKYTCYASN------AAAKVNYTAE-LQVRVAPRWRYEPMDTAIMLGNTISI 747
Fly 748 NCEAEGYPIPTITWFKGQGKGS---KDFKPLSMRNHSLLLNLATDNDEGYYMCQATNEIGAGLKK 809
Fly 810 TIRINVNEPARFEQSARNISSRRNDPVTLDCHAKGDEPI--TIGWTQNNGRIDLNNFRFSIAEMK 872
Fly 873 TEKGVDSQLTIGHSDRHDSGVYRCIAENPYGRAEQIIFLAV----------QERPDTPSHLEIFE 927
Fly 928 VGSRTVKLSWRRPFDGNSPVLSYLVQYQALKYLQSHGSLAAAGGDWNGHVINVSLPSTSISRSYD 992
Fly 993 SDLRESAIVAGLTPATTFLIRMQAINEIERSAYTEA---IVLKTQEEAPTEAPSNVQVQTGGESE 1054
Fly 1055 LIVTWQIPPRESW--NGELIGYTVNCSEEKQNINFISVVNSSLKSTIVSGWATTKATLRGLRKYS 1117
Fly 1118 RYAVTIRAMNSFGSGPWSAAIFGTTAEGVPEAAPQNVNCTALSSQSLKISWLEPPLQFHGGIIQG 1182
Fly 1183 YKILY-----------RPIVHQIDFPAKLEIKRTSNLETYLHTLHKASNYSIRVLAYTATGDGLA 1236
Fly 1237 SHPLFCQTDDDVPDAPAAIKAAALTADSILISWLTPKNRNGIISHYTVYSREAGRKGQAKTH--- 1298
Fly 1299 -MVRVDENGYPVTFESRSLAENQMYEFWVSASTSVGEGEPTSVIAQATNTRAPARIASFGQVVRK 1362
Fly 1363 AVGTGLVLECLAVGNPTPRARWLTRDRPVTFSPFYEVTNEGNLKIHRVEGSLSGNYTCTANNLFG 1427
Fly 1428 SDEIQYQVIAMKPPSAPQIIVQYASADSIRVSWDAPDDGGAPLQGYTISYHTAG--ESWSITELL 1490
Fly 1491 PENNAFTISGLKCGNQYIIKMSAHN-----------MVGSGVASEEINVWTKG 1532 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam3 | NP_996226.2 | IG | 56..133 | CDD:214652 | |
Ig | 56..125 | CDD:143165 | |||
I-set | 246..337 | CDD:254352 | 21/100 (21%) | ||
Ig | 264..334 | CDD:143165 | 16/78 (21%) | ||
I-set | 345..433 | CDD:254352 | 17/95 (18%) | ||
Ig | 358..431 | CDD:143165 | 15/80 (19%) | ||
Ig | 456..533 | CDD:143165 | 23/77 (30%) | ||
IGc2 | 553..619 | CDD:197706 | 9/65 (14%) | ||
I-set | 634..724 | CDD:254352 | 20/96 (21%) | ||
ig | 645..712 | CDD:278476 | 12/72 (17%) | ||
IG_like | 734..815 | CDD:214653 | 25/83 (30%) | ||
Ig | 745..815 | CDD:299845 | 25/72 (35%) | ||
I-set | 820..913 | CDD:254352 | 25/94 (27%) | ||
Ig | 838..920 | CDD:299845 | 24/93 (26%) | ||
FN3 | 917..1033 | CDD:238020 | 29/118 (25%) | ||
FN3 | 1040..1142 | CDD:238020 | 26/103 (25%) | ||
fn3 | 1150..1237 | CDD:278470 | 25/97 (26%) | ||
FN3 | 1263..1345 | CDD:238020 | 20/85 (24%) | ||
Ig | 1350..1436 | CDD:299845 | 16/85 (19%) | ||
IG_like | 1358..1436 | CDD:214653 | 16/77 (21%) | ||
FN3 | 1441..1530 | CDD:238020 | 16/101 (16%) | ||
FN3 | 1542..1620 | CDD:238020 | |||
Nrcam | XP_006516011.1 | Ig_NrCAM | 64..140 | CDD:143282 | 16/78 (21%) |
Ig | 145..237 | CDD:386229 | 17/95 (18%) | ||
Ig | 288..358 | CDD:386229 | 23/81 (28%) | ||
Ig4_NrCAM | 375..450 | CDD:143276 | 23/120 (19%) | ||
IGc2 | 469..532 | CDD:197706 | 23/64 (36%) | ||
Ig | 547..633 | CDD:386229 | 25/94 (27%) | ||
FN3 | 647..737 | CDD:238020 | 29/112 (26%) | ||
fn3 | 750..832 | CDD:365830 | 22/93 (24%) | ||
fn3 | 848..938 | CDD:365830 | 24/95 (25%) | ||
fn3 | 953..1037 | CDD:365830 | 23/88 (26%) | ||
fn3 | 1068..1136 | CDD:365830 | 17/100 (17%) | ||
Bravo_FIGEY | 1191..1280 | CDD:372781 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |