Sequence 1: | NP_996226.2 | Gene: | Dscam3 / 42103 | FlyBaseID: | FBgn0261046 | Length: | 2087 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101611.1 | Gene: | Dscaml1 / 315615 | RGDID: | 1304887 | Length: | 2111 | Species: | Rattus norvegicus |
Alignment Length: | 2148 | Identity: | 627/2148 - (29%) |
---|---|---|---|
Similarity: | 941/2148 - (43%) | Gaps: | 287/2148 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 34 GLRVPTFLL-----------EPAPRLLFGNDT----------GAQVTCTAHGSPPPLVTWVLRDG 77
Fly 78 SLATQVPGLRKISGNGTLHFPPFLAQYYRTDVHEATYRCRASNEAGTVLSRNVQVHAVVRRQFHV 142
Fly 143 HVENTEVYLGNSALIKCAIPEYVRPYVRVASWHRGEEILLPDLSDVAGRYVVLAASGDLYVRSVR 207
Fly 208 SEDGLMKFSCLVTNTLNGERQRSDAVMLQVKELSKNLAPRTTQKPVMEIHVERGNDVHLPCNIQG 272
Fly 273 NPFPIFTWYRVSDSAALYPIPSSQRVILSRTLLLIKNADERDAGKWICQASNQFGEQRIEIRLSV 337
Fly 338 NSYVSVHILPQVQIVNSGGTANFNCTTTGSAIDAIDWLHNGKPLQANNALTTGRDNIRFLSKSSL 402
Fly 403 LVQNVGRRDRGVYQCLVENQRASAQAMAELKLGDTVPELIYTFIEQNVRPGPLISLKCSASGSPP 467
Fly 468 PQFAWLLDSQPIMDVSLHHRFAIGQFVDMSGDVISHLNISHVRPDDGGLYKCVASNSMGSVQHSA 532
Fly 533 RLNVYGPPYVRAIGPIKAVAGEDIIVHCPFAGYPVEQIRWEKAHQELTTSNHYELASVADGGQLV 597
Fly 598 IKNVEPGRDQGIYTCIVRSRAGEEARRDMQLNVNSPPVIEPFKFPKNLQEGGRAQITCAVSSGDM 662
Fly 663 PIYFSWKKDDSSIPSSLQITEKKEEFYSLLVFKDISARHSGKYTCYASNAAAKVNYTAELQVRVA 727
Fly 728 PRWRYEPMDTAIMLGNTISINCEAEGYPIPTITWFKGQGKGS-KDFKPLSMR-------NHSLLL 784
Fly 785 NLATDNDEGYYMCQATNEIGAGLKKTIRINVNEPARFEQSARNISSRRNDPVTLDCHAKGDEPIT 849
Fly 850 IGWTQNNGRIDLNN-FRFSIAEMKTEKGVDSQLTIGHSDRHDSGVYRCIAENPYGRAEQIIFLAV 913
Fly 914 QERPDTPSHLEIFEVGSRTVKLSWRRPFDGNSPVLSYLVQYQALKYLQSHGSLAAAGGDWNGHVI 978
Fly 979 NVSLPSTSISRSYDSDLRESAIVAGLTPATTFLIRMQAINEIERSAYTEAIVLKTQEEAPTEAPS 1043
Fly 1044 NVQVQTGGESELIVTWQIPPRESWNGELIGYTVNCSEEKQNINFISVVNSSLKSTIVSGWATTKA 1108
Fly 1109 ---TLRGLRKYSRYAVTIRAMNSFGSGPWSAAIFGTTAEGVPEAAPQNVNCTALSSQSLKISWLE 1170
Fly 1171 PPLQFHGGIIQGYKILYRPIVHQIDFPAKLEIKRTSNLETYLHTLHKASNYSIRVLAYTATGDGL 1235
Fly 1236 ASHPLFCQTDDDVPDAPAAIKAAALTADSILISWLTPKNRNGIISHYTVYSREAGRKGQAKTHMV 1300
Fly 1301 RVDENGYPVTFESRSLAENQMYEFWVSASTSVGEGEPTSVIAQATNTRAPARIASFGQVVRKAVG 1365
Fly 1366 TGLVLECLAVGNPTPRARWLTRDR-----PVTFSPFYEVTNEGNLKIHRVEGSLSGNYTCTANNL 1425
Fly 1426 FGSDEIQYQVIAMKPPSAPQIIVQYASADSIRVSWDAPDDGGAPLQGYTISYHT-AGESWSITEL 1489
Fly 1490 LPENNAFTISGLKCGNQYIIKMSAHNMVGSGVASEEINVWTKGKASQAPNANELIA-TNATCVNL 1553
Fly 1554 KLSSWQNGGCSIHHFSIEHRPLGDIRWTVVTSDISNAEENRENLIFCDFLPAKWYQLRISATNDA 1618
Fly 1619 GKTTEHYHFSTTNIDGITIPPPSVFPSENDLMNNLINSTNPTSGDWFATLIVVVIITV------- 1676
Fly 1677 --------SIITIALTIKHRRTLCGPI-------------------AEGYESRTLPGDYK----- 1709
Fly 1710 --EDHENRRNQQVYSAS-----PVKTVDKGNESEMYEISP-------------YAT---FSVNGG 1751
Fly 1752 RTGAPAKTPTRAVAAQTPLDYTMQFKTFGHPEGENLNATAYPLLPSSGFGHVKSKSSWHKQRYYN 1816
Fly 1817 TED-----ESTLSKSMTIVAGSQA-GHSKKSNGGRSAK------------SSAACSGVVAGSESD 1863
Fly 1864 TSIS-PS---------------------------------TEFSNMPTYRVPCKSSRSSDGRAVV 1894
Fly 1895 DMFRPDSSTESNNDQGSPAPERRHNTPRHVLGMGMAMGLGGGGGGGVGGGNGPAEKRSAGQRSRK 1959
Fly 1960 HGSAAQQPSNQTLERR----------KCPGSSNSLDSEVDAETAASLAASIAAMAGSGAGADLSG 2014
Fly 2015 GFR 2017 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam3 | NP_996226.2 | IG | 56..133 | CDD:214652 | 27/76 (36%) |
Ig | 56..125 | CDD:143165 | 25/68 (37%) | ||
I-set | 246..337 | CDD:254352 | 26/90 (29%) | ||
Ig | 264..334 | CDD:143165 | 22/69 (32%) | ||
I-set | 345..433 | CDD:254352 | 24/87 (28%) | ||
Ig | 358..431 | CDD:143165 | 20/72 (28%) | ||
Ig | 456..533 | CDD:143165 | 29/76 (38%) | ||
IGc2 | 553..619 | CDD:197706 | 22/65 (34%) | ||
I-set | 634..724 | CDD:254352 | 41/89 (46%) | ||
ig | 645..712 | CDD:278476 | 29/66 (44%) | ||
IG_like | 734..815 | CDD:214653 | 26/88 (30%) | ||
Ig | 745..815 | CDD:299845 | 24/77 (31%) | ||
I-set | 820..913 | CDD:254352 | 27/93 (29%) | ||
Ig | 838..920 | CDD:299845 | 32/82 (39%) | ||
FN3 | 917..1033 | CDD:238020 | 32/115 (28%) | ||
FN3 | 1040..1142 | CDD:238020 | 31/104 (30%) | ||
fn3 | 1150..1237 | CDD:278470 | 27/86 (31%) | ||
FN3 | 1263..1345 | CDD:238020 | 23/81 (28%) | ||
Ig | 1350..1436 | CDD:299845 | 32/90 (36%) | ||
IG_like | 1358..1436 | CDD:214653 | 26/82 (32%) | ||
FN3 | 1441..1530 | CDD:238020 | 31/89 (35%) | ||
FN3 | 1542..1620 | CDD:238020 | 26/78 (33%) | ||
Dscaml1 | NP_001101611.1 | IG | 101..173 | CDD:214652 | 25/71 (35%) |
IGc2 | 101..168 | CDD:197706 | 23/66 (35%) | ||
Ig | 183..276 | CDD:299845 | 30/98 (31%) | ||
IG_like | 195..276 | CDD:214653 | 27/86 (31%) | ||
I-set | 291..369 | CDD:254352 | 25/82 (30%) | ||
IGc2 | 298..359 | CDD:197706 | 21/65 (32%) | ||
IGc2 | 386..447 | CDD:197706 | 20/65 (31%) | ||
I-set | 466..560 | CDD:254352 | 37/96 (39%) | ||
Ig | 466..556 | CDD:299845 | 35/92 (38%) | ||
IGc2 | 577..635 | CDD:197706 | 21/60 (35%) | ||
IG_like | 665..744 | CDD:214653 | 35/78 (45%) | ||
Ig | 673..739 | CDD:143165 | 33/65 (51%) | ||
I-set | 748..843 | CDD:254352 | 28/94 (30%) | ||
Ig7_DSCAM | 765..843 | CDD:143211 | 24/77 (31%) | ||
I-set | 849..942 | CDD:254352 | 27/92 (29%) | ||
Ig | 861..949 | CDD:299845 | 32/88 (36%) | ||
FN3 | 945..1039 | CDD:238020 | 32/116 (28%) | ||
FN3 | 1046..1143 | CDD:238020 | 31/104 (30%) | ||
fn3 | 1151..1237 | CDD:278470 | 27/86 (31%) | ||
FN3 | 1249..1340 | CDD:238020 | 30/93 (32%) | ||
IGc2 | 1364..1428 | CDD:197706 | 22/64 (34%) | ||
FN3 | 1442..1532 | CDD:238020 | 31/89 (35%) | ||
FN3 | 1546..1618 | CDD:238020 | 26/77 (34%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 136 | 1.000 | Domainoid score | I4784 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG47134 | |
OrthoDB | 1 | 1.010 | - | - | D10185at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm9015 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101656 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
10 | 9.690 |