DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam3 and Igsf10

DIOPT Version :9

Sequence 1:NP_996226.2 Gene:Dscam3 / 42103 FlyBaseID:FBgn0261046 Length:2087 Species:Drosophila melanogaster
Sequence 2:XP_038958192.1 Gene:Igsf10 / 310448 RGDID:735030 Length:2647 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam3NP_996226.2 IG 56..133 CDD:214652
Ig 56..125 CDD:143165
I-set 246..337 CDD:254352
Ig 264..334 CDD:143165
I-set 345..433 CDD:254352
Ig 358..431 CDD:143165
Ig 456..533 CDD:143165
IGc2 553..619 CDD:197706
I-set 634..724 CDD:254352
ig 645..712 CDD:278476
IG_like 734..815 CDD:214653
Ig 745..815 CDD:299845
I-set 820..913 CDD:254352
Ig 838..920 CDD:299845
FN3 917..1033 CDD:238020
FN3 1040..1142 CDD:238020
fn3 1150..1237 CDD:278470
FN3 1263..1345 CDD:238020
Ig 1350..1436 CDD:299845
IG_like 1358..1436 CDD:214653
FN3 1441..1530 CDD:238020
FN3 1542..1620 CDD:238020
Igsf10XP_038958192.1 LRRNT 78..110 CDD:214470
leucine-rich repeat 89..108 CDD:275380
leucine-rich repeat 109..132 CDD:275380
LRR_8 131..191 CDD:404697
leucine-rich repeat 133..156 CDD:275380
leucine-rich repeat 157..180 CDD:275380
LRR_8 180..245 CDD:404697
leucine-rich repeat 181..204 CDD:275380
leucine-rich repeat 205..228 CDD:275380
leucine-rich repeat 229..260 CDD:275380
PCC 242..>323 CDD:188093
LRRCT 269..>293 CDD:214507
Ig 532..605 CDD:416386
Ig strand A' 534..537 CDD:409353
Ig strand B 543..550 CDD:409353
Ig strand C 556..562 CDD:409353
Ig strand C' 564..566 CDD:409353
Ig strand D 577..581 CDD:409353
Ig strand E 584..589 CDD:409353
Ig strand F 597..605 CDD:409353
IG 632..712 CDD:214652
Herpes_BLLF1 <1189..1500 CDD:282904
Ig 1690..1763 CDD:416386
Ig strand B 1690..1694 CDD:409353
Ig strand C 1703..1707 CDD:409353
Ig strand E 1730..1734 CDD:409353
Ig strand F 1744..1749 CDD:409353
Ig strand G 1758..1761 CDD:409353
Ig 1768..1861 CDD:416386
Ig strand A 1768..1771 CDD:409353
Ig strand A' 1776..1780 CDD:409353
Ig strand B 1786..1795 CDD:409353
Ig strand C 1800..1805 CDD:409353
Ig strand C' 1808..1810 CDD:409353
Ig strand D 1819..1822 CDD:409353
Ig strand E 1827..1834 CDD:409353
Ig strand F 1840..1848 CDD:409353
Ig strand G 1851..1861 CDD:409353
Ig_3 1865..1944 CDD:404760
Ig strand A 1866..1869 CDD:409353
Ig strand A' 1875..1878 CDD:409353
Ig strand B 1884..1891 CDD:409353
Ig strand C 1897..1903 CDD:409353
Ig strand C' 1909..1911 CDD:409353
Ig strand D 1917..1922 CDD:409353
Ig strand E 1924..1928 CDD:409353
Ig strand F 1937..1945 CDD:409353
Ig strand G 1948..1958 CDD:409353
Ig_3 1965..2044 CDD:404760
putative Ig strand B 1980..1990 CDD:409353
putative Ig strand C 1996..2002 CDD:409353
putative Ig strand D 2018..2021 CDD:409353
putative Ig strand E 2023..2029 CDD:409353
putative Ig strand F 2036..2044 CDD:409353
IG_like 2077..2160 CDD:214653
Ig strand B 2078..2085 CDD:409353
Ig strand C 2093..2097 CDD:409353
Ig strand D 2122..2125 CDD:409353
Ig strand E 2126..2131 CDD:409353
Ig strand F 2139..2147 CDD:409353
Ig strand G 2153..2160 CDD:409353
IG 2178..2252 CDD:214652
IG_like 2283..2354 CDD:214653
Ig strand C 2294..2298 CDD:409353
Ig strand E 2320..2324 CDD:409353
Ig strand F 2334..2339 CDD:409353
Ig_3 2360..2439 CDD:404760
Ig strand B 2379..2383 CDD:409353
Ig strand C 2392..2396 CDD:409353
Ig strand E 2418..2422 CDD:409353
Ig strand F 2432..2437 CDD:409353
Ig_3 2455..2534 CDD:404760
Ig_3 2551..2633 CDD:404760
Ig strand A 2552..2555 CDD:409353
Ig strand A' 2561..2564 CDD:409353
Ig strand B 2570..2577 CDD:409353
Ig strand C 2583..2591 CDD:409353
Ig strand C' 2596..2598 CDD:409353
Ig strand D 2604..2610 CDD:409353
Ig strand E 2612..2616 CDD:409353
Ig strand F 2625..2633 CDD:409353
Ig strand G 2636..2646 CDD:409353
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 52 1.000 Domainoid score I11143
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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